Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   EQW70_RS22275 Genome accession   NZ_CP035226
Coordinates   380920..381060 (+) Length   46 a.a.
NCBI ID   WP_250634839.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103517     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 375920..386060
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQW70_RS22270 srfAB 377784..380876 (+) 3093 Protein_347 surfactin non-ribosomal peptide synthetase SrfAB -
  EQW70_RS22275 comS 380920..381060 (+) 141 WP_250634839.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.09 Da        Isoelectric Point: 9.8310

>NTDB_id=336258 EQW70_RS22275 WP_250634839.1 380920..381060(+) (comS) [Bacillus subtilis strain SRCM103517]
MNRSGKHLISSIILYPRPSGECISSISLDKQTKATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=336258 EQW70_RS22275 WP_250634839.1 380920..381060(+) (comS) [Bacillus subtilis strain SRCM103517]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACAAAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978

Multiple sequence alignment