Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | EQW70_RS13620 | Genome accession | NZ_CP035226 |
| Coordinates | 2578590..2579627 (-) | Length | 345 a.a. |
| NCBI ID | WP_086344083.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain SRCM103517 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2573590..2584627
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQW70_RS13570 (EQW70_13570) | tasA | 2573687..2574472 (-) | 786 | WP_014477324.1 | biofilm matrix protein TasA | - |
| EQW70_RS13575 (EQW70_13575) | sipW | 2574537..2575109 (-) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| EQW70_RS13580 (EQW70_13580) | tapA | 2575093..2575854 (-) | 762 | WP_064671037.1 | amyloid fiber anchoring/assembly protein TapA | - |
| EQW70_RS13585 (EQW70_13585) | yqzG | 2576125..2576451 (+) | 327 | WP_021480018.1 | YqzG/YhdC family protein | - |
| EQW70_RS13590 (EQW70_13590) | spoIITA | 2576493..2576672 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| EQW70_RS13595 (EQW70_13595) | comGG | 2576744..2577118 (-) | 375 | WP_064671036.1 | ComG operon protein ComGG | Machinery gene |
| EQW70_RS13600 (EQW70_13600) | comGF | 2577119..2577502 (-) | 384 | WP_032726158.1 | ComG operon protein ComGF | Machinery gene |
| EQW70_RS13605 (EQW70_13605) | comGE | 2577528..2577875 (-) | 348 | WP_063335293.1 | ComG operon protein 5 | Machinery gene |
| EQW70_RS13610 (EQW70_13610) | comGD | 2577859..2578290 (-) | 432 | WP_032726159.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| EQW70_RS13615 (EQW70_13615) | comGC | 2578280..2578576 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| EQW70_RS13620 (EQW70_13620) | comGB | 2578590..2579627 (-) | 1038 | WP_086344083.1 | comG operon protein ComGB | Machinery gene |
| EQW70_RS13625 (EQW70_13625) | comGA | 2579614..2580684 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| EQW70_RS22495 (EQW70_13630) | - | 2580912..2581043 (-) | 132 | WP_284690695.1 | hypothetical protein | - |
| EQW70_RS13635 (EQW70_13635) | corA | 2581096..2582049 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| EQW70_RS13640 (EQW70_13640) | yqhB | 2582192..2583520 (+) | 1329 | WP_033884708.1 | hemolysin family protein | - |
| EQW70_RS13645 (EQW70_13645) | rsbRD | 2583573..2584409 (-) | 837 | WP_128740572.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39676.12 Da Isoelectric Point: 9.7153
>NTDB_id=336226 EQW70_RS13620 WP_086344083.1 2578590..2579627(-) (comGB) [Bacillus subtilis strain SRCM103517]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=336226 EQW70_RS13620 WP_086344083.1 2578590..2579627(-) (comGB) [Bacillus subtilis strain SRCM103517]
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.071 |
93.623 |
0.928 |