Detailed information    

insolico Bioinformatically predicted

Overview


Name   comZ   Type   Regulator
Locus tag   EQW70_RS06215 Genome accession   NZ_CP035226
Coordinates   1193747..1193938 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain SRCM103517     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context


Location: 1188747..1198938
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQW70_RS06185 (EQW70_06185) argF 1189610..1190569 (+) 960 WP_038828321.1 ornithine carbamoyltransferase -
  EQW70_RS06190 (EQW70_06190) yjzC 1190655..1190834 (+) 180 WP_003245356.1 YjzC family protein -
  EQW70_RS06195 (EQW70_06195) yjzD 1190880..1191065 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  EQW70_RS06200 (EQW70_06200) - 1191315..1192049 (+) 735 WP_049140719.1 hypothetical protein -
  EQW70_RS06205 (EQW70_06205) - 1192131..1192688 (+) 558 WP_014476424.1 hypothetical protein -
  EQW70_RS06210 (EQW70_06210) med 1192779..1193732 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  EQW70_RS06215 (EQW70_06215) comZ 1193747..1193938 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  EQW70_RS06220 (EQW70_06220) yjzB 1193968..1194204 (-) 237 WP_072173825.1 spore coat protein YjzB -
  EQW70_RS06225 (EQW70_06225) fabH 1194369..1195307 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  EQW70_RS06230 (EQW70_06230) fabF 1195330..1196571 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  EQW70_RS06235 (EQW70_06235) yjaZ 1196647..1197432 (+) 786 WP_049140720.1 DUF2268 domain-containing protein -
  EQW70_RS06240 (EQW70_06240) appD 1197624..1198610 (+) 987 WP_049140721.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence


Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=336201 EQW70_RS06215 WP_003224559.1 1193747..1193938(+) (comZ) [Bacillus subtilis strain SRCM103517]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=336201 EQW70_RS06215 WP_003224559.1 1193747..1193938(+) (comZ) [Bacillus subtilis strain SRCM103517]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains


Predicted by InterproScan.

(4-58)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment