Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   EQW70_RS04615 Genome accession   NZ_CP035226
Coordinates   901392..902186 (+) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103517     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 896392..907186
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQW70_RS04585 (EQW70_04585) sxzA 897231..898262 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  EQW70_RS04590 (EQW70_04590) yfhB 898377..899258 (+) 882 WP_041851150.1 PhzF family phenazine biosynthesis isomerase -
  EQW70_RS04595 (EQW70_04595) yfhC 899346..899930 (+) 585 WP_015252518.1 NAD(P)H nitroreductase -
  EQW70_RS04600 (EQW70_04600) yfhD 899969..900160 (-) 192 WP_003233561.1 YfhD family protein -
  EQW70_RS04605 (EQW70_04605) yfhE 900227..900337 (-) 111 WP_003223230.1 YfhE family protein -
  EQW70_RS04610 (EQW70_04610) yfhF 900392..901303 (-) 912 WP_128740137.1 TIGR01777 family oxidoreductase -
  EQW70_RS04615 (EQW70_04615) recX 901392..902186 (+) 795 WP_029726844.1 recombination regulator RecX Regulator
  EQW70_RS04620 (EQW70_04620) yfhH 902188..902502 (+) 315 WP_003244592.1 YfhH family protein -
  EQW70_RS04625 (EQW70_04625) yfhI 902645..903838 (+) 1194 WP_003243500.1 MFS transporter -
  EQW70_RS04630 (EQW70_04630) sspK 903870..904022 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  EQW70_RS04635 (EQW70_04635) yfhJ 904147..904416 (+) 270 WP_003243789.1 YfhJ family protein -
  EQW70_RS04640 (EQW70_04640) yfhK 904560..905078 (+) 519 WP_015252515.1 SH3 domain-containing protein -
  EQW70_RS04645 (EQW70_04645) spdL 905163..905480 (+) 318 WP_021481164.1 SdpC immunity protein SpdL -
  EQW70_RS04650 (EQW70_04650) ephM 905482..906342 (+) 861 WP_128740138.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=336192 EQW70_RS04615 WP_029726844.1 901392..902186(+) (recX) [Bacillus subtilis strain SRCM103517]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=336192 EQW70_RS04615 WP_029726844.1 901392..902186(+) (recX) [Bacillus subtilis strain SRCM103517]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment