Detailed information    

insolico Bioinformatically predicted

Overview


Name   xerS   Type   Machinery gene
Locus tag   SGGBAA2069_RS05635 Genome accession   NC_015215
Coordinates   1128519..1129589 (+) Length   356 a.a.
NCBI ID   WP_003064732.1    Uniprot ID   A0A1H9NID7
Organism   Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1123519..1134589
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGGBAA2069_RS05615 (SGGBAA2069_c10670) - 1123700..1125448 (+) 1749 WP_013643114.1 ABC transporter ATP-binding protein -
  SGGBAA2069_RS05620 (SGGBAA2069_c10680) - 1125463..1126050 (+) 588 WP_009854186.1 MptD family putative ECF transporter S component -
  SGGBAA2069_RS05625 (SGGBAA2069_c10690) - 1126123..1126821 (+) 699 WP_043913679.1 energy-coupling factor transporter transmembrane component T -
  SGGBAA2069_RS05630 (SGGBAA2069_c10700) - 1126814..1128199 (+) 1386 WP_013643116.1 ABC transporter ATP-binding protein -
  SGGBAA2069_RS05635 (SGGBAA2069_c10710) xerS 1128519..1129589 (+) 1071 WP_003064732.1 tyrosine recombinase XerS Machinery gene
  SGGBAA2069_RS05640 (SGGBAA2069_c10720) - 1129695..1130375 (-) 681 WP_009854191.1 helix-turn-helix transcriptional regulator -
  SGGBAA2069_RS05645 (SGGBAA2069_c10730) - 1130459..1131406 (-) 948 WP_009854192.1 sensor histidine kinase -
  SGGBAA2069_RS05650 (SGGBAA2069_c10740) braR 1131403..1132065 (-) 663 WP_012961975.1 response regulator transcription factor Regulator
  SGGBAA2069_RS05655 (SGGBAA2069_c10750) - 1132153..1134132 (-) 1980 WP_009854194.1 FtsX-like permease family protein -

Sequence


Protein


Download         Length: 356 a.a.        Molecular weight: 41334.41 Da        Isoelectric Point: 9.4174

>NTDB_id=33619 SGGBAA2069_RS05635 WP_003064732.1 1128519..1129589(+) (xerS) [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
MKREKLLEKIDELKEIMPWYVLDYYQSKLSVPYSFTTLYEYLKEYRRFFEWLLDSGISDVTKIADVELTTLEHLSKKDME
SFILYLRERPSLNTYSTKQGVSQTTINRTLSALSSLFKYLTEEVEDENGEPYFYRNVMKKIATKKKKETLAARAENIKGK
LFLGDETMAFIDYIDTEYQNKLSHRALSSFQKNKERDLALIALLLASGVRLSEAVNLDLKDLNLNMMVIEVTRKGGKRDS
VNVANFAKPYLEAYLQIRAPRYKAEKQDQALFLTEYRGVPNRIDASSVEKLVAKYSQDFKVRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHASTQVTDLYTHIVNDEQKNALDKL

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=33619 SGGBAA2069_RS05635 WP_003064732.1 1128519..1129589(+) (xerS) [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
ATGAAACGTGAAAAATTACTTGAAAAAATTGATGAACTTAAAGAAATAATGCCTTGGTACGTCTTAGACTATTACCAATC
AAAACTTTCGGTTCCTTATAGTTTCACAACTTTATATGAATACTTAAAAGAATATCGCCGATTTTTCGAATGGCTTTTGG
ATTCTGGAATTTCAGATGTTACTAAAATTGCTGACGTTGAATTAACGACTCTGGAACATCTTTCTAAAAAAGACATGGAA
TCATTCATCCTTTATCTGCGTGAACGTCCTTCTTTGAACACTTATTCAACAAAACAAGGTGTCTCACAAACAACGATTAA
TCGGACGTTATCGGCACTTTCAAGCCTGTTTAAATACCTAACAGAAGAGGTCGAAGATGAAAATGGTGAGCCCTACTTCT
ATCGAAATGTCATGAAAAAAATCGCTACTAAGAAGAAAAAAGAAACGCTGGCAGCTCGAGCTGAAAATATAAAAGGCAAA
CTTTTCCTAGGTGACGAGACCATGGCATTTATCGACTATATCGATACAGAGTATCAAAATAAGCTCTCTCACCGCGCCCT
CTCCTCCTTCCAAAAGAATAAGGAGCGTGATTTAGCGCTTATTGCTCTTCTGCTTGCCTCTGGTGTCCGTCTTTCAGAAG
CTGTTAATCTTGATTTGAAAGACTTAAACCTTAATATGATGGTTATCGAAGTCACTCGTAAAGGTGGAAAACGTGATTCT
GTCAATGTTGCTAACTTTGCTAAGCCTTATTTAGAAGCTTATTTGCAAATCAGAGCGCCTCGCTATAAGGCGGAAAAACA
AGACCAAGCTCTCTTTTTAACAGAATATCGCGGTGTTCCTAACCGTATTGATGCTTCAAGTGTTGAAAAGTTAGTTGCTA
AATACTCTCAAGATTTCAAAGTTCGTGTAACACCCCACAAACTACGCCACACACTTGCAACACGTCTTTACGATGCTACT
AAATCACAAGTCCTAGTTAGCCACCAATTAGGACATGCCAGTACACAAGTTACCGACTTATACACCCATATTGTCAACGA
CGAACAAAAAAATGCCTTAGATAAGCTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1H9NID7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  xerS Streptococcus pneumoniae R6

83.427

100

0.834


Multiple sequence alignment