Detailed information NTG0335932

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: EQJ84_RS19155
• Genome accession: NZ_CP035191
• Coordinates: 3707817..3708962 (+)
• Length: 381 a.a.
• NCBI ID: WP_029318693.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM104011
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3702817..3713962

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQJ84_RS19130 (EQJ84_19130)	albF	3702833..3704113 (+)	1281	WP_041850411.1	pitrilysin family protein	-
EQJ84_RS19135 (EQJ84_19135)	albG	3704110..3704811 (+)	702	WP_041850410.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
EQJ84_RS19140 (EQJ84_19140)	ywhL	3704817..3706193 (-)	1377	WP_128441926.1	YncE family protein	-
EQJ84_RS19145 (EQJ84_19145)	ywhK	3706232..3707587 (-)	1356	WP_015250986.1	YncE family protein	-
EQJ84_RS21650 (EQJ84_19150)	-	3707584..3707814 (-)	231	WP_069703618.1	hypothetical protein	-
EQJ84_RS19155 (EQJ84_19155)	rapF	3707817..3708962 (+)	1146	WP_029318693.1	response regulator aspartate phosphatase RapF	Regulator
EQJ84_RS19160 (EQJ84_19160)	phrF	3708946..3709065 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
EQJ84_RS21545	-	3709135..3709299 (-)	165	WP_248719425.1	hypothetical protein	-
EQJ84_RS19165 (EQJ84_19165)	-	3709220..3709629 (+)	410	Protein_3701	YbaK/EbsC family protein	-
EQJ84_RS19170 (EQJ84_19170)	speB	3709660..3710532 (-)	873	WP_003227545.1	agmatinase	-
EQJ84_RS19175 (EQJ84_19175)	speE	3710593..3711423 (-)	831	WP_003227543.1	spermidine synthase	-
EQJ84_RS19180 (EQJ84_19180)	pbpG	3711626..3713701 (+)	2076	WP_038427996.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45594.05 Da
• Isoelectric Point: 5.0624

>NTDB_id=335932 EQJ84_RS19155 WP_029318693.1 3707817..3708962(+) (rapF) [Bacillus subtilis strain SRCM104011]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=335932 EQJ84_RS19155 WP_029318693.1 3707817..3708962(+) (rapF) [Bacillus subtilis strain SRCM104011]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGATCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACATATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.95	100	0.99
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572