Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   EQJ84_RS16025 Genome accession   NZ_CP035191
Coordinates   3082424..3084736 (-) Length   770 a.a.
NCBI ID   WP_077671126.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM104011     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3077424..3089736
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQJ84_RS15985 (EQJ84_15985) mrpB 3077891..3078322 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  EQJ84_RS15990 (EQJ84_15990) mrpC 3078322..3078663 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  EQJ84_RS15995 (EQJ84_15995) mrpD 3078656..3080137 (+) 1482 WP_041850587.1 Na+/H+ antiporter subunit D -
  EQJ84_RS16000 (EQJ84_16000) mrpE 3080143..3080619 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  EQJ84_RS16005 (EQJ84_16005) mrpF 3080619..3080903 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  EQJ84_RS16010 (EQJ84_16010) mnhG 3080887..3081261 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  EQJ84_RS16015 (EQJ84_16015) yuxO 3081300..3081680 (-) 381 WP_014477831.1 hotdog fold thioesterase -
  EQJ84_RS16020 (EQJ84_16020) comA 3081699..3082343 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  EQJ84_RS16025 (EQJ84_16025) comP 3082424..3084736 (-) 2313 WP_077671126.1 histidine kinase Regulator
  EQJ84_RS16030 (EQJ84_16030) comX 3084752..3084973 (-) 222 WP_014480704.1 competence pheromone ComX -
  EQJ84_RS16035 (EQJ84_16035) - 3084975..3085838 (-) 864 WP_043858576.1 polyprenyl synthetase family protein -
  EQJ84_RS16040 (EQJ84_16040) degQ 3086023..3086163 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  EQJ84_RS21520 - 3086385..3086447 (+) 63 Protein_3083 hypothetical protein -
  EQJ84_RS16045 (EQJ84_16045) - 3086626..3086994 (+) 369 WP_041850584.1 hypothetical protein -
  EQJ84_RS16050 (EQJ84_16050) pdeH 3086970..3088199 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89540.78 Da        Isoelectric Point: 8.4292

>NTDB_id=335921 EQJ84_RS16025 WP_077671126.1 3082424..3084736(-) (comP) [Bacillus subtilis strain SRCM104011]
MYRYINVYKYLSLVFIILSFIYVIYLSYSFAFNIFVGADVKINEQGKLEVTNVLDYTDEYYSGVKKGDIILEVNGEKGSD
IQLKSGRLVNVESLIVERDNKSFHLQNVSLISEENLFMYLIPVISYSICLFCIFFIYRINKVRKSTSAYILILFLLFVSV
AYVSACGARRGEEISTYLLVLTLVSCPVLYIHFIYKYFIELGTKLFEKKILIIMYMLPLINLLLEDVLSNRLKSSAFLSN
LNLISFFVLVLTVSILIHKGIRKFKQKEQKSILKVLAYTNIFSFSPFIVFFAVPYVFLEKYVSPFSLAAFTLVIPFSLVY
QFMTNRLYNIDFVVGRLKYYGFLAITPTIIVVTIFNYIQQPKDIFYLVKLTIAIYVLMFAVFYFKEIIDFRFKLKRFTEK
FNYQDGIFKFTQLIKQASSVDQVLNHFKNTILDVLNIDNACVYDNSKGEITLLSKNNFKDLTYKNHEQYVKNFTGDIGKI
KEFKQGFIIKIGERGDKSFLVLCFSSYNTFKLTRDEIAWLQTLAFYTNVSLENVMKIEELMVHLEDLKQQESNPVWLKKL
MYTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKGDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLY
DLGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDD
GVGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=335921 EQJ84_RS16025 WP_077671126.1 3082424..3084736(-) (comP) [Bacillus subtilis strain SRCM104011]
ATGTACAGATATATTAACGTCTATAAATATTTGTCTCTAGTTTTTATCATTTTAAGTTTTATTTATGTTATATACCTCTC
GTATAGCTTTGCTTTTAACATCTTCGTAGGTGCGGATGTAAAGATAAATGAACAGGGTAAGTTAGAGGTCACTAATGTTT
TAGATTATACAGATGAATATTATTCAGGTGTGAAAAAGGGAGATATCATTCTTGAAGTAAATGGGGAGAAAGGCAGTGAT
ATTCAATTAAAAAGTGGAAGATTGGTCAATGTAGAAAGTTTAATTGTTGAGAGAGATAATAAATCATTTCATTTACAAAA
TGTAAGCCTAATCAGTGAAGAAAATTTATTTATGTATCTCATTCCTGTAATATCTTATTCAATCTGTTTATTTTGTATAT
TTTTTATTTATAGAATAAATAAAGTAAGAAAATCAACTTCTGCTTATATTTTAATATTATTTTTGTTATTTGTATCAGTA
GCGTATGTAAGTGCATGCGGGGCAAGAAGAGGTGAAGAGATAAGCACTTACCTGCTTGTTCTTACTTTAGTCAGCTGTCC
GGTGTTATATATTCATTTTATATATAAATACTTTATAGAATTAGGAACAAAGTTATTCGAAAAGAAGATTTTAATCATTA
TGTATATGCTCCCGCTAATAAATCTTTTATTAGAGGACGTTCTGAGTAATAGATTAAAATCTTCGGCTTTTTTGTCTAAT
CTGAATTTGATTTCATTTTTTGTCCTAGTTCTTACTGTATCGATTCTTATCCATAAAGGGATAAGAAAATTTAAACAAAA
AGAGCAAAAGTCAATTTTGAAAGTCCTTGCTTATACAAATATCTTTTCTTTCAGTCCGTTTATTGTCTTTTTTGCTGTTC
CATATGTGTTTTTGGAGAAGTATGTCTCACCTTTTAGTTTGGCTGCTTTTACACTTGTTATACCTTTTTCTTTAGTATAT
CAATTTATGACTAATAGACTTTATAATATCGACTTTGTTGTGGGGCGGCTTAAGTACTACGGTTTTTTAGCCATTACACC
TACTATTATCGTAGTGACCATCTTTAATTACATTCAGCAACCAAAGGATATCTTTTATTTAGTTAAACTAACAATTGCAA
TATATGTGCTTATGTTTGCCGTTTTTTACTTTAAAGAGATTATTGACTTTCGTTTCAAGTTAAAAAGATTTACTGAAAAA
TTTAATTATCAAGATGGGATTTTTAAATTTACTCAATTAATAAAGCAAGCATCATCAGTAGATCAAGTACTTAATCACTT
TAAGAATACAATCTTAGATGTATTAAATATAGATAATGCTTGTGTGTATGATAATTCAAAAGGAGAAATTACTCTCCTTA
GCAAGAATAACTTTAAAGATCTCACTTATAAAAATCATGAGCAATATGTGAAAAATTTTACTGGTGATATCGGCAAAATT
AAAGAGTTTAAACAAGGTTTTATTATTAAAATAGGTGAACGAGGAGACAAATCATTTTTAGTACTCTGTTTCTCAAGTTA
TAATACTTTTAAATTAACAAGAGATGAAATTGCATGGCTCCAAACATTAGCGTTTTATACAAATGTTTCATTGGAAAACG
TGATGAAAATAGAGGAATTGATGGTGCATCTTGAGGATTTAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTC
ATGTACACGATCGAGGAAAAACAACGCTCCGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTT
AAAACGCCAGTGTGAGCTGTTTTTGGGTGATTTTAAGAAGGGTGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTG
TACAGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTAT
GATCTTGGATTGGTGAAGGCGTTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATAC
CGGCAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTATACCGGATCATTCAAGAGTTTCTGTCTAATGCGG
TTAAGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATTAGTATTCAAAACAAAATCGTTCTTCATTATGAGGACGAT
GGCGTTGGGTTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGC
TTTAGATGGGCGCCTACGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

56.307

99.87

0.562


Multiple sequence alignment