Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | EQJ84_RS10220 | Genome accession | NZ_CP035191 |
| Coordinates | 2049509..2050639 (+) | Length | 376 a.a. |
| NCBI ID | WP_021481447.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain SRCM104011 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2044509..2055639
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQJ84_RS10180 (EQJ84_10180) | yopB | 2045275..2045501 (-) | 227 | Protein_1949 | helix-turn-helix transcriptional regulator | - |
| EQJ84_RS10185 (EQJ84_10185) | - | 2045702..2046403 (-) | 702 | WP_038829963.1 | hypothetical protein | - |
| EQJ84_RS10195 (EQJ84_10195) | - | 2047049..2047414 (+) | 366 | WP_038829962.1 | hypothetical protein | - |
| EQJ84_RS10200 (EQJ84_10200) | - | 2047595..2047870 (+) | 276 | Protein_1952 | SOS response-associated peptidase family protein | - |
| EQJ84_RS10205 (EQJ84_10205) | - | 2048144..2048518 (+) | 375 | WP_021481445.1 | YoqO family protein | - |
| EQJ84_RS21640 (EQJ84_10210) | - | 2049230..2049376 (+) | 147 | Protein_1954 | phage holin | - |
| EQJ84_RS10220 (EQJ84_10220) | rapC | 2049509..2050639 (+) | 1131 | WP_021481447.1 | tetratricopeptide repeat protein | Regulator |
| EQJ84_RS21345 | - | 2050629..2050772 (+) | 144 | WP_153801665.1 | hypothetical protein | - |
| EQJ84_RS21465 (EQJ84_10225) | - | 2050926..2051126 (-) | 201 | WP_021481449.1 | hypothetical protein | - |
| EQJ84_RS21470 | - | 2051348..2051722 (-) | 375 | Protein_1958 | UV damage repair protein UvrX | - |
| EQJ84_RS10235 (EQJ84_10235) | - | 2051720..2051875 (-) | 156 | Protein_1959 | T7SS effector LXG polymorphic toxin | - |
| EQJ84_RS10240 (EQJ84_10240) | yobM | 2051976..2052533 (-) | 558 | WP_038829958.1 | SMI1/KNR4 family protein | - |
| EQJ84_RS10245 (EQJ84_10245) | aoxN | 2052661..2054097 (+) | 1437 | WP_120363441.1 | flavin monoamine oxidase family protein | - |
| EQJ84_RS10250 (EQJ84_10250) | csaA | 2054347..2054679 (-) | 333 | WP_032725963.1 | chaperone CsaA | - |
| EQJ84_RS10255 (EQJ84_10255) | yobQ | 2054744..2055469 (-) | 726 | WP_072175277.1 | helix-turn-helix domain-containing protein | - |
Sequence
Protein
Download Length: 376 a.a. Molecular weight: 44393.16 Da Isoelectric Point: 5.8915
>NTDB_id=335894 EQJ84_RS10220 WP_021481447.1 2049509..2050639(+) (rapC) [Bacillus subtilis strain SRCM104011]
MEQLIPSSTVGVKINEWYKYIRMFAVPDAEILKAEVEEEIKHMKEDQDLLLYYSLMCFRHQLMLDYLEPKSLNEERPKIS
DLLEKIESSQTKLKGVLEYYCNFFRGMYEFDKKDYIKAIRSYKIAEKKLALVTDEIERAEFYFKMAEVYYHMKQTHVSMH
YAEAALNIYKDQKTYTVRRIQCAFVVAGNFDDLESHEKAVPHLQRALKDSKAINKHKLIGASLYNLGNCYYKMKEYDKAA
EYIEQAVSLYENDKSDLLPHTLFTLTQIYFKMKNIEKAFILYKKGIEKAQAINDDVLVAEFNYLKALYIDSIDKRTVFRT
FSVLKDNVMYPDLEELALDTANYCKEIGQFENSTTFFDVMVDARIQIQRGECLYEI
MEQLIPSSTVGVKINEWYKYIRMFAVPDAEILKAEVEEEIKHMKEDQDLLLYYSLMCFRHQLMLDYLEPKSLNEERPKIS
DLLEKIESSQTKLKGVLEYYCNFFRGMYEFDKKDYIKAIRSYKIAEKKLALVTDEIERAEFYFKMAEVYYHMKQTHVSMH
YAEAALNIYKDQKTYTVRRIQCAFVVAGNFDDLESHEKAVPHLQRALKDSKAINKHKLIGASLYNLGNCYYKMKEYDKAA
EYIEQAVSLYENDKSDLLPHTLFTLTQIYFKMKNIEKAFILYKKGIEKAQAINDDVLVAEFNYLKALYIDSIDKRTVFRT
FSVLKDNVMYPDLEELALDTANYCKEIGQFENSTTFFDVMVDARIQIQRGECLYEI
Nucleotide
Download Length: 1131 bp
>NTDB_id=335894 EQJ84_RS10220 WP_021481447.1 2049509..2050639(+) (rapC) [Bacillus subtilis strain SRCM104011]
ATGGAGCAATTAATTCCGTCATCCACGGTTGGAGTTAAAATCAATGAGTGGTATAAATACATACGGATGTTCGCCGTTCC
AGATGCTGAGATATTAAAAGCAGAGGTTGAAGAAGAAATAAAACATATGAAGGAAGATCAAGACTTATTGTTGTATTATT
CTCTAATGTGTTTTCGTCATCAGCTAATGCTGGATTACCTTGAACCTAAGTCATTGAATGAAGAACGCCCTAAAATTTCA
GACTTATTAGAAAAGATCGAAAGCAGTCAAACAAAGCTTAAAGGTGTCCTGGAATATTACTGCAATTTCTTTAGAGGAAT
GTACGAATTTGATAAGAAGGATTATATAAAAGCAATAAGGTCATATAAAATTGCTGAGAAAAAGCTCGCTTTAGTAACAG
ACGAAATTGAACGAGCTGAGTTTTATTTCAAAATGGCTGAAGTGTATTATCACATGAAACAAACCCATGTATCAATGCAC
TATGCTGAAGCAGCACTTAACATTTATAAAGACCAAAAAACTTATACTGTTCGCCGAATACAATGTGCATTTGTTGTAGC
AGGCAACTTTGATGATCTGGAAAGTCATGAAAAAGCAGTTCCGCATCTTCAAAGAGCCCTAAAAGATTCTAAAGCTATAA
ACAAGCACAAACTAATTGGGGCATCATTATATAATTTGGGAAATTGTTATTATAAGATGAAAGAGTATGACAAAGCTGCT
GAATATATTGAACAAGCAGTTTCACTGTACGAAAACGATAAAAGTGATCTTCTCCCTCACACGTTATTTACACTGACACA
AATTTACTTTAAAATGAAGAATATTGAAAAAGCCTTTATACTTTATAAAAAAGGAATCGAGAAAGCACAAGCCATTAACG
ATGATGTCTTAGTTGCTGAGTTTAATTACTTAAAGGCTTTATATATCGACTCTATAGATAAACGCACAGTTTTCCGAACT
TTTTCTGTACTTAAAGATAATGTAATGTATCCAGATTTAGAGGAATTAGCACTCGACACGGCTAATTATTGTAAGGAGAT
AGGGCAATTTGAGAACTCAACCACCTTTTTTGACGTCATGGTGGATGCCCGAATCCAAATACAAAGAGGAGAGTGTTTAT
ATGAAATTTAA
ATGGAGCAATTAATTCCGTCATCCACGGTTGGAGTTAAAATCAATGAGTGGTATAAATACATACGGATGTTCGCCGTTCC
AGATGCTGAGATATTAAAAGCAGAGGTTGAAGAAGAAATAAAACATATGAAGGAAGATCAAGACTTATTGTTGTATTATT
CTCTAATGTGTTTTCGTCATCAGCTAATGCTGGATTACCTTGAACCTAAGTCATTGAATGAAGAACGCCCTAAAATTTCA
GACTTATTAGAAAAGATCGAAAGCAGTCAAACAAAGCTTAAAGGTGTCCTGGAATATTACTGCAATTTCTTTAGAGGAAT
GTACGAATTTGATAAGAAGGATTATATAAAAGCAATAAGGTCATATAAAATTGCTGAGAAAAAGCTCGCTTTAGTAACAG
ACGAAATTGAACGAGCTGAGTTTTATTTCAAAATGGCTGAAGTGTATTATCACATGAAACAAACCCATGTATCAATGCAC
TATGCTGAAGCAGCACTTAACATTTATAAAGACCAAAAAACTTATACTGTTCGCCGAATACAATGTGCATTTGTTGTAGC
AGGCAACTTTGATGATCTGGAAAGTCATGAAAAAGCAGTTCCGCATCTTCAAAGAGCCCTAAAAGATTCTAAAGCTATAA
ACAAGCACAAACTAATTGGGGCATCATTATATAATTTGGGAAATTGTTATTATAAGATGAAAGAGTATGACAAAGCTGCT
GAATATATTGAACAAGCAGTTTCACTGTACGAAAACGATAAAAGTGATCTTCTCCCTCACACGTTATTTACACTGACACA
AATTTACTTTAAAATGAAGAATATTGAAAAAGCCTTTATACTTTATAAAAAAGGAATCGAGAAAGCACAAGCCATTAACG
ATGATGTCTTAGTTGCTGAGTTTAATTACTTAAAGGCTTTATATATCGACTCTATAGATAAACGCACAGTTTTCCGAACT
TTTTCTGTACTTAAAGATAATGTAATGTATCCAGATTTAGAGGAATTAGCACTCGACACGGCTAATTATTGTAAGGAGAT
AGGGCAATTTGAGAACTCAACCACCTTTTTTGACGTCATGGTGGATGCCCGAATCCAAATACAAAGAGGAGAGTGTTTAT
ATGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
51.064 |
100 |
0.511 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
45.119 |
100 |
0.455 |