Detailed information NTG0335740

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: FYA04_RS20410
• Genome accession: NZ_CP043213
• Coordinates: 4174653..4175636 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli O16:H48 strain CV601gfp
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4169653..4180636

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FYA04_RS20380 (FYA04_20380)	bcsF	4169814..4170005 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
FYA04_RS20385 (FYA04_20385)	bcsG	4170002..4171681 (+)	1680	WP_000191622.1	cellulose biosynthesis protein BcsG	-
FYA04_RS20390 (FYA04_20390)	ldrD	4171768..4171875 (-)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
FYA04_RS20400 (FYA04_20400)	yhjV	4172351..4173622 (+)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
FYA04_RS20405 (FYA04_20405)	dppF	4173652..4174656 (-)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
FYA04_RS20410 (FYA04_20410)	amiE	4174653..4175636 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
FYA04_RS20415 (FYA04_20415)	dppC	4175647..4176549 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
FYA04_RS20420 (FYA04_20420)	dppB	4176559..4177578 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
FYA04_RS23415	-	4177742..4177852 (+)	111	Protein_4017	hypothetical protein	-
FYA04_RS20430 (FYA04_20430)	dppA	4177886..4179493 (-)	1608	Protein_4018	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=335740 FYA04_RS20410 WP_001196486.1 4174653..4175636(-) (amiE) [Escherichia coli O16:H48 strain CV601gfp]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=335740 FYA04_RS20410 WP_001196486.1 4174653..4175636(-) (amiE) [Escherichia coli O16:H48 strain CV601gfp]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404