Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | FYA04_RS02670 | Genome accession | NZ_CP043213 |
| Coordinates | 575598..576038 (-) | Length | 146 a.a. |
| NCBI ID | WP_000360904.1 | Uniprot ID | P36647 |
| Organism | Escherichia coli O16:H48 strain CV601gfp | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 570598..581038
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYA04_RS02650 (FYA04_02650) | coaE | 571088..571708 (-) | 621 | WP_001269520.1 | dephospho-CoA kinase | - |
| FYA04_RS22920 | - | 571733..571777 (+) | 45 | WP_120795372.1 | protein YacM | - |
| FYA04_RS02655 (FYA04_02655) | guaC | 571933..572976 (+) | 1044 | WP_001217338.1 | GMP reductase | - |
| FYA04_RS02660 (FYA04_02660) | hofC | 573011..574213 (-) | 1203 | WP_000157266.1 | protein transport protein HofC | - |
| FYA04_RS02665 (FYA04_02665) | pilB | 574203..575588 (-) | 1386 | WP_001025145.1 | type II secretion system protein GspE | Machinery gene |
| FYA04_RS02670 (FYA04_02670) | pilA | 575598..576038 (-) | 441 | WP_000360904.1 | prepilin peptidase-dependent pilin | Machinery gene |
| FYA04_RS02675 (FYA04_02675) | nadC | 576241..577134 (-) | 894 | WP_001135174.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| FYA04_RS02680 (FYA04_02680) | ampD | 577222..577773 (+) | 552 | WP_000923721.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| FYA04_RS02685 (FYA04_02685) | ampE | 577770..578624 (+) | 855 | WP_000172005.1 | beta-lactamase regulator AmpE | - |
| FYA04_RS02690 (FYA04_02690) | aroP | 578667..580040 (-) | 1374 | WP_000969915.1 | aromatic amino acid transporter AroP | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 15621.75 Da Isoelectric Point: 4.3938
>NTDB_id=335684 FYA04_RS02670 WP_000360904.1 575598..576038(-) (pilA) [Escherichia coli O16:H48 strain CV601gfp]
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
Nucleotide
Download Length: 441 bp
>NTDB_id=335684 FYA04_RS02670 WP_000360904.1 575598..576038(-) (pilA) [Escherichia coli O16:H48 strain CV601gfp]
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
43.089 |
84.247 |
0.363 |