Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   SGGBAA2069_RS00275 Genome accession   NC_015215
Coordinates   34096..34851 (+) Length   251 a.a.
NCBI ID   WP_009853183.1    Uniprot ID   A0A1I7JAI7
Organism   Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 29096..39851
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGGBAA2069_RS00255 mreD 29628..30134 (+) 507 WP_043913538.1 rod shape-determining protein MreD -
  SGGBAA2069_RS00260 (SGGBAA2069_c00180) - 30247..31617 (+) 1371 WP_043913539.1 CHAP domain-containing protein -
  SGGBAA2069_RS00265 (SGGBAA2069_c00190) - 31760..32728 (+) 969 WP_003062784.1 ribose-phosphate diphosphokinase -
  SGGBAA2069_RS00270 (SGGBAA2069_c00200) - 32931..34106 (+) 1176 WP_009853182.1 pyridoxal phosphate-dependent aminotransferase -
  SGGBAA2069_RS00275 (SGGBAA2069_c00210) recO 34096..34851 (+) 756 WP_009853183.1 DNA repair protein RecO Machinery gene
  SGGBAA2069_RS00280 (SGGBAA2069_c00220) plsX 35023..36018 (+) 996 WP_012961315.1 phosphate acyltransferase PlsX -
  SGGBAA2069_RS00285 (SGGBAA2069_c00230) - 36035..36277 (+) 243 WP_009853185.1 acyl carrier protein -
  SGGBAA2069_RS00290 (SGGBAA2069_c00240) purC 36402..37112 (+) 711 WP_013642619.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -

Sequence

Protein


Download         Length: 251 a.a.        Molecular weight: 29160.50 Da        Isoelectric Point: 6.4977

>NTDB_id=33566 SGGBAA2069_RS00275 WP_009853183.1 34096..34851(+) (recO) [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
MQTKETYGLVLYNRNYREDDKLVKIFTETNGKHMFFVKHAGKSRFNSVIQPLTVAKFILKINDTGLSFIEDYKEVDSFKE
INADLFKLSYASYVTALADAAVPDGVADPQLFAFVNKTLSLMEEGLDYEILTNIFEIQLLERFGVSLNFHECAFCHRVGL
PFDFSHKYSGLLCPEHYGKDDYRSHLDPNVLYLVDRFQAIHFDELKTISVKPEMKRKLRLFIDDIYDNYVGLRLKSKKFI
DDLGTWGNIMK

Nucleotide


Download         Length: 756 bp        

>NTDB_id=33566 SGGBAA2069_RS00275 WP_009853183.1 34096..34851(+) (recO) [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
ATGCAAACTAAGGAAACTTATGGTCTTGTCCTCTATAATCGTAATTATCGTGAGGATGATAAGCTAGTCAAAATTTTTAC
AGAAACCAATGGAAAGCATATGTTTTTTGTTAAACATGCTGGTAAATCTCGGTTTAATTCTGTTATTCAGCCGTTAACGG
TGGCAAAATTTATTTTAAAAATTAATGATACAGGTCTGTCTTTCATTGAAGATTATAAGGAAGTTGACTCTTTTAAGGAA
ATTAATGCAGATTTGTTTAAGTTGTCCTATGCTTCTTATGTGACAGCATTGGCGGATGCAGCTGTGCCAGATGGTGTGGC
AGACCCGCAGTTGTTTGCATTTGTTAATAAGACGCTTTCCTTAATGGAAGAGGGACTTGACTACGAAATTTTGACTAATA
TTTTTGAGATTCAACTTTTAGAACGATTTGGTGTTAGTCTTAATTTTCATGAGTGTGCTTTTTGTCATCGGGTTGGATTG
CCCTTTGACTTTTCGCACAAATATTCTGGTCTGCTTTGTCCAGAGCATTATGGTAAAGATGATTATCGTAGTCATCTTGA
TCCGAATGTGCTGTACCTGGTGGACCGATTTCAAGCCATTCATTTTGATGAATTAAAGACGATTTCAGTTAAGCCTGAGA
TGAAACGAAAATTGCGTTTATTTATTGATGATATTTATGATAATTATGTCGGTCTTCGTTTGAAAAGTAAAAAATTCATT
GATGATTTAGGGACTTGGGGAAATATTATGAAATAA

Domains

Predicted by InterProScan.

Recombination protein O C terminal (RecO_C)

(84-237)

Recombination protein O N terminal (RecO_N)

(1-78)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1I7JAI7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Streptococcus pneumoniae R6

63.347

100

0.633

Multiple sequence alignment