Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   EQI87_RS08145 Genome accession   NZ_CP035166
Coordinates   1509584..1510159 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103971     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1504584..1515159
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQI87_RS08115 (EQI87_08115) dapD 1504772..1505482 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  EQI87_RS08120 (EQI87_08120) dapI 1505552..1506676 (+) 1125 WP_046380993.1 N-acetyldiaminopimelate deacetylase -
  EQI87_RS08125 (EQI87_08125) ykuS 1506738..1506983 (+) 246 WP_003232382.1 YkuS family protein -
  EQI87_RS08130 (EQI87_08130) mscT 1507020..1507823 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  EQI87_RS08135 (EQI87_08135) ahpA 1508060..1508602 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  EQI87_RS08140 (EQI87_08140) ykuV 1508672..1509118 (+) 447 WP_024571971.1 thiol-disulfide oxidoreductase YkuV -
  EQI87_RS08145 (EQI87_08145) rok 1509584..1510159 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  EQI87_RS08150 (EQI87_08150) cse15 1510200..1511165 (-) 966 WP_024571970.1 spore protein Cse15 -
  EQI87_RS08155 (EQI87_08155) mobA 1511302..1511901 (+) 600 WP_024571969.1 molybdenum cofactor guanylyltransferase -
  EQI87_RS08160 (EQI87_08160) moeB 1511952..1512971 (+) 1020 WP_032721477.1 molybdopterin-synthase adenylyltransferase MoeB -
  EQI87_RS08165 (EQI87_08165) glp 1512989..1514281 (+) 1293 WP_003232372.1 gephyrin-like molybdotransferase Glp -
  EQI87_RS08170 (EQI87_08170) mobB 1514242..1514763 (+) 522 WP_029725925.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=335353 EQI87_RS08145 WP_003232378.1 1509584..1510159(+) (rok) [Bacillus subtilis strain SRCM103971]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=335353 EQI87_RS08145 WP_003232378.1 1509584..1510159(+) (rok) [Bacillus subtilis strain SRCM103971]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment