Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   EQI87_RS05015 Genome accession   NZ_CP035166
Coordinates   943225..944019 (+) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103971     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 938225..949019
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQI87_RS04985 (EQI87_04985) sxzA 939064..940095 (+) 1032 WP_003243057.1 iron ABC transporter permease -
  EQI87_RS04990 (EQI87_04990) yfhB 940210..941091 (+) 882 WP_046380867.1 PhzF family phenazine biosynthesis isomerase -
  EQI87_RS04995 (EQI87_04995) yfhC 941179..941763 (+) 585 WP_032723010.1 nitroreductase -
  EQI87_RS05000 (EQI87_05000) yfhD 941802..941993 (-) 192 WP_003233561.1 YfhD family protein -
  EQI87_RS05005 (EQI87_05005) yfhE 942060..942170 (-) 111 WP_003223230.1 YfhE family protein -
  EQI87_RS05010 (EQI87_05010) yfhF 942225..943136 (-) 912 WP_033883295.1 TIGR01777 family oxidoreductase -
  EQI87_RS05015 (EQI87_05015) recX 943225..944019 (+) 795 WP_029726844.1 recombination regulator RecX Regulator
  EQI87_RS05020 (EQI87_05020) yfhH 944021..944335 (+) 315 WP_003244592.1 YfhH family protein -
  EQI87_RS05025 (EQI87_05025) yfhI 944478..945671 (+) 1194 WP_003243500.1 MFS transporter -
  EQI87_RS05030 (EQI87_05030) sspK 945703..945855 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  EQI87_RS05035 (EQI87_05035) yfhJ 945980..946249 (+) 270 WP_015252516.1 YfhJ family protein -
  EQI87_RS05040 (EQI87_05040) yfhK 946394..946912 (+) 519 WP_029317456.1 SH3 domain-containing protein -
  EQI87_RS05045 (EQI87_05045) spdL 946997..947314 (+) 318 WP_038428649.1 SdpC immunity protein SpdL -
  EQI87_RS05050 (EQI87_05050) ephM 947316..948176 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=335335 EQI87_RS05015 WP_029726844.1 943225..944019(+) (recX) [Bacillus subtilis strain SRCM103971]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=335335 EQI87_RS05015 WP_029726844.1 943225..944019(+) (recX) [Bacillus subtilis strain SRCM103971]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTTTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment