Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | EQI56_RS13075 | Genome accession | NZ_CP035165 |
| Coordinates | 2509659..2510696 (-) | Length | 345 a.a. |
| NCBI ID | WP_041850016.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain SRCM103881 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2504659..2515696
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQI56_RS13025 (EQI56_13025) | tasA | 2504757..2505542 (-) | 786 | WP_015251717.1 | biofilm matrix protein TasA | - |
| EQI56_RS13030 (EQI56_13030) | sipW | 2505606..2506178 (-) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| EQI56_RS13035 (EQI56_13035) | tapA | 2506162..2506923 (-) | 762 | WP_015251716.1 | amyloid fiber anchoring/assembly protein TapA | - |
| EQI56_RS13040 (EQI56_13040) | yqzG | 2507195..2507521 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| EQI56_RS13045 (EQI56_13045) | spoIITA | 2507563..2507742 (-) | 180 | WP_003230176.1 | YqzE family protein | - |
| EQI56_RS13050 (EQI56_13050) | comGG | 2507813..2508187 (-) | 375 | WP_015251714.1 | ComG operon protein ComGG | Machinery gene |
| EQI56_RS13055 (EQI56_13055) | comGF | 2508188..2508571 (-) | 384 | WP_041850015.1 | ComG operon protein ComGF | Machinery gene |
| EQI56_RS13060 (EQI56_13060) | comGE | 2508597..2508944 (-) | 348 | WP_003230165.1 | ComG operon protein 5 | Machinery gene |
| EQI56_RS13065 (EQI56_13065) | comGD | 2508928..2509359 (-) | 432 | WP_004398628.1 | comG operon protein ComGD | Machinery gene |
| EQI56_RS13070 (EQI56_13070) | comGC | 2509349..2509645 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| EQI56_RS13075 (EQI56_13075) | comGB | 2509659..2510696 (-) | 1038 | WP_041850016.1 | comG operon protein ComGB | Machinery gene |
| EQI56_RS13080 (EQI56_13080) | comGA | 2510683..2511753 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| EQI56_RS13090 (EQI56_13090) | corA | 2512164..2513117 (-) | 954 | WP_029317911.1 | magnesium transporter CorA | - |
| EQI56_RS13095 (EQI56_13095) | yqhB | 2513260..2514588 (+) | 1329 | WP_041850018.1 | hemolysin family protein | - |
| EQI56_RS13100 (EQI56_13100) | rsbRD | 2514641..2515477 (-) | 837 | WP_041850019.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39728.18 Da Isoelectric Point: 9.6257
>NTDB_id=335285 EQI56_RS13075 WP_041850016.1 2509659..2510696(-) (comGB) [Bacillus subtilis strain SRCM103881]
MKKIRKVWLLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAALILLVYLSMLVPMYQMMNQM
MKKIRKVWLLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAALILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=335285 EQI56_RS13075 WP_041850016.1 2509659..2510696(-) (comGB) [Bacillus subtilis strain SRCM103881]
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATTCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGCTGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATTCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGCTGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.381 |
93.623 |
0.93 |