Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   EQI56_RS06025 Genome accession   NZ_CP035165
Coordinates   1165871..1166062 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain SRCM103881     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1160871..1171062
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQI56_RS05995 (EQI56_05995) argF 1161735..1162694 (+) 960 WP_003232980.1 ornithine carbamoyltransferase -
  EQI56_RS06000 (EQI56_06000) yjzC 1162780..1162959 (+) 180 WP_003245356.1 YjzC family protein -
  EQI56_RS06005 (EQI56_06005) yjzD 1163005..1163190 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  EQI56_RS06010 (EQI56_06010) - 1163439..1164173 (+) 735 WP_003245223.1 hypothetical protein -
  EQI56_RS06015 (EQI56_06015) - 1164255..1164812 (+) 558 WP_003232974.1 hypothetical protein -
  EQI56_RS06020 (EQI56_06020) med 1164903..1165856 (+) 954 WP_003245494.1 transcriptional regulator Med Regulator
  EQI56_RS06025 (EQI56_06025) comZ 1165871..1166062 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  EQI56_RS06030 (EQI56_06030) yjzB 1166092..1166331 (-) 240 WP_003232972.1 spore coat protein YjzB -
  EQI56_RS06035 (EQI56_06035) fabH 1166496..1167434 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  EQI56_RS06040 (EQI56_06040) fabF 1167457..1168698 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  EQI56_RS06045 (EQI56_06045) yjaZ 1168774..1169559 (+) 786 WP_119899243.1 DUF2268 domain-containing protein -
  EQI56_RS06050 (EQI56_06050) appD 1169751..1170737 (+) 987 WP_033883591.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=335259 EQI56_RS06025 WP_003224559.1 1165871..1166062(+) (comZ) [Bacillus subtilis strain SRCM103881]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=335259 EQI56_RS06025 WP_003224559.1 1165871..1166062(+) (comZ) [Bacillus subtilis strain SRCM103881]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment