Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   EQI48_RS07795 Genome accession   NZ_CP035164
Coordinates   1475252..1475827 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM104005     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1470252..1480827
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQI48_RS07765 (EQI48_07765) dapD 1470439..1471149 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  EQI48_RS07770 (EQI48_07770) dapI 1471219..1472343 (+) 1125 WP_021479383.1 N-acetyldiaminopimelate deacetylase -
  EQI48_RS07775 (EQI48_07775) ykuS 1472405..1472650 (+) 246 WP_003232382.1 YkuS family protein -
  EQI48_RS07780 (EQI48_07780) mscT 1472687..1473490 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  EQI48_RS07785 (EQI48_07785) ahpA 1473727..1474269 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  EQI48_RS07790 (EQI48_07790) ykuV 1474340..1474786 (+) 447 WP_038428900.1 thiol-disulfide oxidoreductase YkuV -
  EQI48_RS07795 (EQI48_07795) rok 1475252..1475827 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  EQI48_RS07800 (EQI48_07800) cse15 1475868..1476833 (-) 966 WP_029727015.1 spore protein Cse15 -
  EQI48_RS07805 (EQI48_07805) mobA 1476970..1477569 (+) 600 WP_021479380.1 molybdenum cofactor guanylyltransferase -
  EQI48_RS07810 (EQI48_07810) moeB 1477620..1478639 (+) 1020 WP_017696813.1 molybdopterin-synthase adenylyltransferase MoeB -
  EQI48_RS07815 (EQI48_07815) glp 1478657..1479949 (+) 1293 WP_038427631.1 gephyrin-like molybdotransferase Glp -
  EQI48_RS07820 (EQI48_07820) mobB 1479910..1480431 (+) 522 WP_029725925.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=335188 EQI48_RS07795 WP_003232378.1 1475252..1475827(+) (rok) [Bacillus subtilis strain SRCM104005]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=335188 EQI48_RS07795 WP_003232378.1 1475252..1475827(+) (rok) [Bacillus subtilis strain SRCM104005]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment