Detailed information
Bioinformatically predicted
Overview
| Name | med | Type | Regulator |
| Locus tag | EQI48_RS06170 | Genome accession | NZ_CP035164 |
| Coordinates | 1189229..1190182 (+) | Length | 317 a.a. |
| NCBI ID | WP_003245494.1 | Uniprot ID | A0AAE2SG99 |
| Organism | Bacillus subtilis strain SRCM104005 | ||
| Function | regulation of regulators (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1184229..1195182
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQI48_RS06145 (EQI48_06145) | argF | 1186061..1187020 (+) | 960 | WP_003232980.1 | ornithine carbamoyltransferase | - |
| EQI48_RS06150 (EQI48_06150) | yjzC | 1187106..1187285 (+) | 180 | WP_003245356.1 | YjzC family protein | - |
| EQI48_RS06155 (EQI48_06155) | yjzD | 1187331..1187516 (-) | 186 | WP_003245236.1 | DUF2929 domain-containing protein | - |
| EQI48_RS06160 (EQI48_06160) | - | 1187765..1188499 (+) | 735 | WP_003245223.1 | hypothetical protein | - |
| EQI48_RS06165 (EQI48_06165) | - | 1188581..1189138 (+) | 558 | WP_003232974.1 | hypothetical protein | - |
| EQI48_RS06170 (EQI48_06170) | med | 1189229..1190182 (+) | 954 | WP_003245494.1 | transcriptional regulator Med | Regulator |
| EQI48_RS06175 (EQI48_06175) | comZ | 1190197..1190388 (+) | 192 | WP_003224559.1 | ComG operon transcriptional repressor ComZ | Regulator |
| EQI48_RS06180 (EQI48_06180) | yjzB | 1190418..1190657 (-) | 240 | WP_003232972.1 | spore coat protein YjzB | - |
| EQI48_RS06185 (EQI48_06185) | fabH | 1190822..1191760 (+) | 939 | WP_003232971.1 | beta-ketoacyl-ACP synthase III | - |
| EQI48_RS06190 (EQI48_06190) | fabF | 1191783..1193024 (+) | 1242 | WP_003244890.1 | beta-ketoacyl-ACP synthase II | - |
| EQI48_RS06195 (EQI48_06195) | yjaZ | 1193100..1193885 (+) | 786 | WP_003232967.1 | DUF2268 domain-containing protein | - |
| EQI48_RS06200 (EQI48_06200) | appD | 1194077..1195063 (+) | 987 | WP_003232965.1 | oligopeptide ABC transporter ATP-binding protein AppD | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35310.80 Da Isoelectric Point: 4.5457
>NTDB_id=335178 EQI48_RS06170 WP_003245494.1 1189229..1190182(+) (med) [Bacillus subtilis strain SRCM104005]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE
Nucleotide
Download Length: 954 bp
>NTDB_id=335178 EQI48_RS06170 WP_003245494.1 1189229..1190182(+) (med) [Bacillus subtilis strain SRCM104005]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| med | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |