Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | EQI27_RS13075 | Genome accession | NZ_CP035163 |
| Coordinates | 2524753..2525163 (-) | Length | 136 a.a. |
| NCBI ID | WP_009967785.1 | Uniprot ID | A0A6I4D881 |
| Organism | Bacillus subtilis strain SRCM103923 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2525359..2575481 | 2524753..2525163 | flank | 196 |
Gene organization within MGE regions
Location: 2524753..2575481
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQI27_RS13075 (EQI27_13075) | nucA/comI | 2524753..2525163 (-) | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | Machinery gene |
| EQI27_RS13080 (EQI27_13080) | - | 2525359..2525709 (+) | 351 | Protein_2535 | sigma-70 family RNA polymerase sigma factor | - |
| EQI27_RS13085 (EQI27_13085) | spoIVCA | 2525736..2527196 (-) | 1461 | WP_223257626.1 | site-specific DNA recombinase SpoIVCA | - |
| EQI27_RS21605 (EQI27_13090) | - | 2527154..2527332 (-) | 179 | Protein_2537 | hypothetical protein | - |
| EQI27_RS13095 (EQI27_13095) | arsC | 2527687..2528106 (-) | 420 | WP_004398596.1 | thioredoxin-dependent arsenate reductase | - |
| EQI27_RS13100 (EQI27_13100) | acr3 | 2528118..2529158 (-) | 1041 | WP_004398718.1 | arsenite efflux transporter Acr3 | - |
| EQI27_RS13105 (EQI27_13105) | arsK | 2529181..2529621 (-) | 441 | WP_003229954.1 | ArsI/CadI family heavy metal resistance metalloenzyme | - |
| EQI27_RS13110 (EQI27_13110) | arsR | 2529681..2529998 (-) | 318 | WP_004399122.1 | arsenical resistance operon transcriptional regulator ArsR | - |
| EQI27_RS13115 (EQI27_13115) | yqcI | 2530370..2531134 (-) | 765 | WP_085186524.1 | YqcI/YcgG family protein | - |
| EQI27_RS13120 (EQI27_13120) | rapE | 2531577..2532704 (+) | 1128 | WP_004398842.1 | response regulator aspartate phosphatase RapE | - |
| EQI27_RS13125 (EQI27_13125) | phrE | 2532694..2532828 (+) | 135 | WP_004398770.1 | phosphatase RapE inhibitor PhrE | - |
| EQI27_RS13130 (EQI27_13130) | - | 2532938..2533096 (+) | 159 | WP_003245945.1 | hypothetical protein | - |
| EQI27_RS13135 (EQI27_13135) | yqcG | 2533466..2535060 (+) | 1595 | Protein_2546 | LXG family T7SS effector endonuclease toxin YqcG | - |
| EQI27_RS13140 (EQI27_13140) | - | 2535219..2535652 (+) | 434 | Protein_2547 | suppressor of fused domain protein | - |
| EQI27_RS13145 (EQI27_13145) | - | 2535770..2535916 (+) | 147 | WP_009967791.1 | hypothetical protein | - |
| EQI27_RS13150 (EQI27_13150) | - | 2535913..2536275 (-) | 363 | WP_003229947.1 | hypothetical protein | - |
| EQI27_RS13155 (EQI27_13155) | - | 2536291..2536770 (-) | 480 | WP_004399085.1 | hypothetical protein | - |
| EQI27_RS13160 (EQI27_13160) | cwlA | 2536935..2537753 (-) | 819 | WP_017697459.1 | N-acetylmuramoyl-L-alanine amidase CwlA | - |
| EQI27_RS13165 (EQI27_13165) | skhD | 2537798..2538220 (-) | 423 | WP_017697460.1 | holin family protein | - |
| EQI27_RS13170 (EQI27_13170) | xepAK | 2538266..2539159 (-) | 894 | WP_032722160.1 | hypothetical protein | - |
| EQI27_RS13175 (EQI27_13175) | yqcE | 2539247..2539411 (-) | 165 | WP_003229944.1 | XkdX family protein | - |
| EQI27_RS13180 (EQI27_13180) | yqcD | 2539408..2539743 (-) | 336 | WP_009967793.1 | XkdW family protein | - |
| EQI27_RS13185 (EQI27_13185) | yqcC | 2539753..2540853 (-) | 1101 | WP_032722161.1 | pyocin knob domain-containing protein | - |
| EQI27_RS13190 (EQI27_13190) | - | 2540857..2541129 (-) | 273 | WP_032722163.1 | hypothetical protein | - |
| EQI27_RS13195 (EQI27_13195) | yqcA | 2541126..2541704 (-) | 579 | WP_032722164.1 | YmfQ family protein | - |
| EQI27_RS13200 (EQI27_13200) | yqbT | 2541688..2542734 (-) | 1047 | WP_032722165.1 | baseplate J/gp47 family protein | - |
| EQI27_RS13205 (EQI27_13205) | yqbS | 2542727..2543152 (-) | 426 | WP_032722166.1 | DUF2634 domain-containing protein | - |
| EQI27_RS13210 (EQI27_13210) | yqbR | 2543165..2543431 (-) | 267 | WP_032722167.1 | DUF2577 family protein | - |
| EQI27_RS13215 (EQI27_13215) | yqbQ | 2543428..2544408 (-) | 981 | WP_032722168.1 | hypothetical protein | - |
| EQI27_RS13220 (EQI27_13220) | yqbP | 2544421..2545080 (-) | 660 | WP_032722169.1 | LysM peptidoglycan-binding domain-containing protein | - |
| EQI27_RS13225 (EQI27_13225) | yqbO | 2545073..2549830 (-) | 4758 | WP_043940167.1 | phage tail tape measure protein | - |
| EQI27_RS13230 (EQI27_13230) | - | 2549833..2549970 (-) | 138 | WP_021480099.1 | hypothetical protein | - |
| EQI27_RS13235 (EQI27_13235) | - | 2550012..2550461 (-) | 450 | WP_032722171.1 | phage portal protein | - |
| EQI27_RS13240 (EQI27_13240) | txpA | 2550607..2550786 (+) | 180 | WP_004398662.1 | type I toxin-antitoxin system toxin TxpA | - |
| EQI27_RS13245 (EQI27_13245) | bsrH | 2551166..2551255 (+) | 90 | WP_075058862.1 | type I toxin-antitoxin system toxin BsrH | - |
| EQI27_RS13250 (EQI27_13250) | yqbM | 2551509..2551952 (-) | 444 | WP_003229930.1 | phage tail tube protein | - |
| EQI27_RS13255 (EQI27_13255) | yqbK | 2551955..2553354 (-) | 1400 | Protein_2570 | phage tail sheath family protein | - |
| EQI27_RS13260 (EQI27_13260) | - | 2553355..2553546 (-) | 192 | WP_010886574.1 | hypothetical protein | - |
| EQI27_RS13265 (EQI27_13265) | yqbJ | 2553543..2553980 (-) | 438 | WP_003229927.1 | DUF6838 family protein | - |
| EQI27_RS13270 (EQI27_13270) | yqbI | 2553993..2554496 (-) | 504 | WP_003246050.1 | HK97 gp10 family phage protein | - |
| EQI27_RS13275 (EQI27_13275) | yqbH | 2554493..2554855 (-) | 363 | WP_003229925.1 | YqbH/XkdH family protein | - |
| EQI27_RS13280 (EQI27_13280) | gkpG | 2554852..2555247 (-) | 396 | WP_004398566.1 | DUF3199 family protein | - |
| EQI27_RS13285 (EQI27_13285) | yqbF | 2555251..2555562 (-) | 312 | WP_003229923.1 | YqbF domain-containing protein | - |
| EQI27_RS13290 (EQI27_13290) | skdG | 2555573..2556508 (-) | 936 | WP_003229922.1 | phage major capsid protein | - |
| EQI27_RS13295 (EQI27_13295) | yqbD | 2556527..2557495 (-) | 969 | WP_003229921.1 | XkdF-like putative serine protease domain-containing protein | - |
| EQI27_RS13300 (EQI27_13300) | - | 2557528..2558181 (-) | 654 | WP_003229920.1 | hypothetical protein | - |
| EQI27_RS13305 (EQI27_13305) | yqbB | 2558222..2559139 (-) | 918 | WP_004398748.1 | phage head morphogenesis protein | - |
| EQI27_RS13310 (EQI27_13310) | yqbA | 2559136..2560668 (-) | 1533 | WP_004398894.1 | phage portal protein | - |
| EQI27_RS13315 (EQI27_13315) | stmB | 2560672..2561967 (-) | 1296 | WP_003229917.1 | PBSX family phage terminase large subunit | - |
| EQI27_RS13320 (EQI27_13320) | terS | 2561960..2562679 (-) | 720 | WP_003229916.1 | phage terminase small subunit | - |
| EQI27_RS13325 (EQI27_13325) | - | 2562747..2563211 (-) | 465 | WP_004398685.1 | hypothetical protein | - |
| EQI27_RS13330 (EQI27_13330) | yqaQ | 2563355..2563810 (-) | 456 | WP_004398775.1 | hypothetical protein | - |
| EQI27_RS13335 (EQI27_13335) | - | 2564008..2564937 (+) | 930 | WP_003229913.1 | hypothetical protein | - |
| EQI27_RS13340 (EQI27_13340) | yqaO | 2565011..2565217 (-) | 207 | WP_003229912.1 | XtrA/YqaO family protein | - |
| EQI27_RS13345 (EQI27_13345) | yqaN | 2565299..2565727 (-) | 429 | WP_009967809.1 | RusA family crossover junction endodeoxyribonuclease | - |
| EQI27_RS13350 (EQI27_13350) | - | 2565823..2565972 (-) | 150 | WP_003229910.1 | hypothetical protein | - |
| EQI27_RS13355 (EQI27_13355) | sknM | 2565963..2566904 (-) | 942 | WP_075058863.1 | ATP-binding protein | - |
| EQI27_RS13360 (EQI27_13360) | yqaL | 2566786..2567463 (-) | 678 | WP_116362964.1 | DnaD domain protein | - |
| EQI27_RS13365 (EQI27_13365) | recT | 2567539..2568393 (-) | 855 | WP_003229907.1 | recombinase RecT | - |
| EQI27_RS13370 (EQI27_13370) | yqaJ | 2568396..2569355 (-) | 960 | WP_004398673.1 | YqaJ viral recombinase family protein | - |
| EQI27_RS13375 (EQI27_13375) | - | 2569461..2569655 (-) | 195 | WP_003229905.1 | hypothetical protein | - |
| EQI27_RS13380 (EQI27_13380) | - | 2569615..2569788 (-) | 174 | WP_119123069.1 | hypothetical protein | - |
| EQI27_RS13385 (EQI27_13385) | sknH | 2569785..2570042 (-) | 258 | WP_003245994.1 | YqaH family protein | - |
| EQI27_RS13390 (EQI27_13390) | yqaG | 2570039..2570608 (-) | 570 | WP_004398626.1 | helix-turn-helix transcriptional regulator | - |
| EQI27_RS13395 (EQI27_13395) | - | 2570682..2570822 (-) | 141 | WP_003229902.1 | hypothetical protein | - |
| EQI27_RS13400 (EQI27_13400) | yqaF | 2570852..2571082 (-) | 231 | WP_004398958.1 | helix-turn-helix transcriptional regulator | - |
| EQI27_RS13405 (EQI27_13405) | sknR | 2571258..2571608 (+) | 351 | WP_004398704.1 | transcriptional regulator SknR | - |
| EQI27_RS13410 (EQI27_13410) | - | 2571875..2572042 (-) | 168 | WP_003229900.1 | hypothetical protein | - |
| EQI27_RS13415 (EQI27_13415) | yqaC | 2572398..2572934 (-) | 537 | WP_004399117.1 | AAA family ATPase | - |
| EQI27_RS13420 (EQI27_13420) | yqaB | 2573203..2573721 (+) | 519 | WP_015714342.1 | ImmA/IrrE family metallo-endopeptidase | - |
| EQI27_RS13425 (EQI27_13425) | - | 2573727..2574119 (+) | 393 | Protein_2604 | sigma-70 family RNA polymerase sigma factor | - |
| EQI27_RS13430 (EQI27_13430) | - | 2574119..2574235 (+) | 117 | WP_041850087.1 | hypothetical protein | - |
| EQI27_RS13435 (EQI27_13435) | - | 2574201..2574398 (-) | 198 | Protein_2606 | recombinase family protein | - |
| EQI27_RS13440 (EQI27_13440) | - | 2574356..2574520 (-) | 165 | WP_080332536.1 | hypothetical protein | - |
| EQI27_RS13445 (EQI27_13445) | psiE | 2575065..2575481 (-) | 417 | WP_003246154.1 | phosphate-starvation-inducible protein PsiE | - |
Sequence
Protein
Download Length: 136 a.a. Molecular weight: 14967.97 Da Isoelectric Point: 5.1853
>NTDB_id=335131 EQI27_RS13075 WP_009967785.1 2524753..2525163(-) (nucA/comI) [Bacillus subtilis strain SRCM103923]
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
Nucleotide
Download Length: 411 bp
>NTDB_id=335131 EQI27_RS13075 WP_009967785.1 2524753..2525163(-) (nucA/comI) [Bacillus subtilis strain SRCM103923]
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAGCAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGGGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGATAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACG
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCTGTCTGCGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAA
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAGCAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGGGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGATAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACG
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCTGTCTGCGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
62.609 |
84.559 |
0.529 |