Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   EQH95_RS08215 Genome accession   NZ_CP035162
Coordinates   1562195..1562659 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain SRCM103886     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1557195..1567659
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH95_RS08195 (EQH95_08195) kinA 1557663..1559495 (+) 1833 WP_069837479.1 sporulation histidine kinase KinA -
  EQH95_RS08200 (EQH95_08200) dapX 1559492..1560673 (-) 1182 WP_014479654.1 aminotransferase A -
  EQH95_RS08205 (EQH95_08205) - 1560875..1561036 (-) 162 WP_003245246.1 hypothetical protein -
  EQH95_RS08210 (EQH95_08210) cheV 1561240..1562151 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  EQH95_RS08215 (EQH95_08215) kre 1562195..1562659 (-) 465 WP_003232406.1 YkyB family protein Regulator
  EQH95_RS08220 (EQH95_08220) ykuC 1562785..1564077 (-) 1293 WP_014479656.1 MFS transporter -
  EQH95_RS08225 (EQH95_08225) ltdD 1564153..1564647 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  EQH95_RS08230 (EQH95_08230) ppeE 1564704..1565564 (-) 861 WP_015483175.1 metallophosphoesterase -
  EQH95_RS08235 (EQH95_08235) fadH 1565707..1566471 (+) 765 WP_015383534.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=335028 EQH95_RS08215 WP_003232406.1 1562195..1562659(-) (kre) [Bacillus subtilis strain SRCM103886]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=335028 EQH95_RS08215 WP_003232406.1 1562195..1562659(-) (kre) [Bacillus subtilis strain SRCM103886]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment