Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   EQH95_RS04945 Genome accession   NZ_CP035162
Coordinates   968156..968950 (+) Length   264 a.a.
NCBI ID   WP_014479217.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103886     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 963156..973950
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH95_RS04915 (EQH95_04915) sxzA 963995..965026 (+) 1032 WP_003243057.1 iron ABC transporter permease -
  EQH95_RS04920 (EQH95_04920) yfhB 965141..966022 (+) 882 WP_069837383.1 PhzF family phenazine biosynthesis isomerase -
  EQH95_RS04925 (EQH95_04925) yfhC 966110..966694 (+) 585 WP_032723010.1 nitroreductase -
  EQH95_RS04930 (EQH95_04930) yfhD 966733..966924 (-) 192 WP_003233561.1 YfhD family protein -
  EQH95_RS04935 (EQH95_04935) yfhE 966991..967101 (-) 111 WP_003223230.1 YfhE family protein -
  EQH95_RS04940 (EQH95_04940) yfhF 967156..968067 (-) 912 WP_041332787.1 TIGR01777 family oxidoreductase -
  EQH95_RS04945 (EQH95_04945) recX 968156..968950 (+) 795 WP_014479217.1 recombination regulator RecX Regulator
  EQH95_RS04950 (EQH95_04950) yfhH 968952..969266 (+) 315 WP_003244592.1 YfhH family protein -
  EQH95_RS04955 (EQH95_04955) yfhI 969409..970602 (+) 1194 WP_003243500.1 MFS transporter -
  EQH95_RS04960 (EQH95_04960) sspK 970634..970786 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  EQH95_RS04965 (EQH95_04965) yfhJ 970911..971180 (+) 270 WP_003243789.1 YfhJ family protein -
  EQH95_RS04970 (EQH95_04970) yfhK 971325..971843 (+) 519 WP_014479218.1 SH3 domain-containing protein -
  EQH95_RS04975 (EQH95_04975) spdL 971928..972260 (+) 333 WP_014479219.1 SdpC immunity protein SpdL -
  EQH95_RS04980 (EQH95_04980) ephM 972247..973107 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31029.21 Da        Isoelectric Point: 6.6686

>NTDB_id=335012 EQH95_RS04945 WP_014479217.1 968156..968950(+) (recX) [Bacillus subtilis strain SRCM103886]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAIK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=335012 EQH95_RS04945 WP_014479217.1 968156..968950(+) (recX) [Bacillus subtilis strain SRCM103886]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATTAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992

Multiple sequence alignment