Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   EQH88_RS06600 Genome accession   NZ_CP035161
Coordinates   1248203..1248859 (+) Length   218 a.a.
NCBI ID   WP_003232942.1    Uniprot ID   A0AAQ3ENL6
Organism   Bacillus subtilis strain SRCM103862     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1243203..1253859
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH88_RS06570 (EQH88_06570) oppF 1243668..1244585 (+) 918 WP_069703689.1 oligopeptide ABC transporter ATP-binding protein OppF -
  EQH88_RS06575 (EQH88_06575) yjbB 1244692..1245909 (+) 1218 WP_080477793.1 MFS transporter -
  EQH88_RS06580 (EQH88_06580) yjbC 1246073..1246651 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  EQH88_RS06585 (EQH88_06585) spx 1246832..1247227 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  EQH88_RS06590 (EQH88_06590) yjbE 1247270..1247926 (-) 657 WP_003232944.1 TerC family protein -
  EQH88_RS06595 (EQH88_06595) - 1248096..1248236 (+) 141 WP_119122854.1 hypothetical protein -
  EQH88_RS06600 (EQH88_06600) mecA 1248203..1248859 (+) 657 WP_003232942.1 adaptor protein MecA Regulator
  EQH88_RS06605 (EQH88_06605) - 1248854..1248976 (-) 123 WP_003232940.1 hypothetical protein -
  EQH88_RS06610 (EQH88_06610) coiA 1249020..1250171 (+) 1152 WP_069703690.1 competence protein CoiA Machinery gene
  EQH88_RS06615 (EQH88_06615) pepF 1250401..1252230 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  EQH88_RS06620 (EQH88_06620) - 1252268..1252435 (-) 168 WP_003244944.1 hypothetical protein -
  EQH88_RS06630 (EQH88_06630) spxH 1252749..1253648 (-) 900 WP_003245184.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25762.62 Da        Isoelectric Point: 4.0841

>NTDB_id=334945 EQH88_RS06600 WP_003232942.1 1248203..1248859(+) (mecA) [Bacillus subtilis strain SRCM103862]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSNLNVNGSKTTLYSFENR
YYLYVDFCNMTDEEVENQLSILLEYANESSISIHRLEEYGKLIISEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=334945 EQH88_RS06600 WP_003232942.1 1248203..1248859(+) (mecA) [Bacillus subtilis strain SRCM103862]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTTTTCTGGGAAGTCATGGATGAAGTTCATGAAGAAGAGGAAT
TCGCTGTGGAAGGCCCACTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTCCAGAAAGAAGAGCAAGCCGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAATTTGAACGTTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTAGATTTTTGCAATATGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGCTGGAGTACGCAAA
TGAATCCTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

99.083

100

0.991

Multiple sequence alignment