Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   EQH88_RS04965 Genome accession   NZ_CP035161
Coordinates   944815..945609 (+) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103862     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 939815..950609
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH88_RS04935 (EQH88_04935) sxzA 940654..941685 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  EQH88_RS04940 (EQH88_04940) yfhB 941800..942681 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  EQH88_RS04945 (EQH88_04945) yfhC 942769..943353 (+) 585 WP_003243940.1 nitroreductase -
  EQH88_RS04950 (EQH88_04950) yfhD 943392..943583 (-) 192 WP_003233561.1 YfhD family protein -
  EQH88_RS04955 (EQH88_04955) yfhE 943650..943760 (-) 111 WP_003223230.1 YfhE family protein -
  EQH88_RS04960 (EQH88_04960) yfhF 943815..944726 (-) 912 WP_029726845.1 TIGR01777 family oxidoreductase -
  EQH88_RS04965 (EQH88_04965) recX 944815..945609 (+) 795 WP_029726844.1 recombination regulator RecX Regulator
  EQH88_RS04970 (EQH88_04970) yfhH 945611..945931 (+) 321 WP_029726843.1 YfhH family protein -
  EQH88_RS04975 (EQH88_04975) yfhI 946068..947261 (+) 1194 WP_080477804.1 MFS transporter -
  EQH88_RS04980 (EQH88_04980) sspK 947293..947445 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  EQH88_RS04985 (EQH88_04985) yfhJ 947570..947839 (+) 270 WP_003243789.1 YfhJ family protein -
  EQH88_RS04990 (EQH88_04990) yfhK 947984..948502 (+) 519 WP_015715537.1 SH3 domain-containing protein -
  EQH88_RS04995 (EQH88_04995) spdL 948587..948919 (+) 333 WP_024573182.1 SdpC immunity protein SpdL -
  EQH88_RS05000 (EQH88_05000) ephM 948906..949766 (+) 861 WP_069703773.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=334933 EQH88_RS04965 WP_029726844.1 944815..945609(+) (recX) [Bacillus subtilis strain SRCM103862]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=334933 EQH88_RS04965 WP_029726844.1 944815..945609(+) (recX) [Bacillus subtilis strain SRCM103862]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAAATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment