Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | EQK21_RS07780 | Genome accession | NZ_CP035110 |
| Coordinates | 1550989..1551519 (-) | Length | 176 a.a. |
| NCBI ID | WP_148484979.1 | Uniprot ID | - |
| Organism | Latilactobacillus curvatus strain SRCM103465 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1545989..1556519
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQK21_RS07770 (EQK21_07770) | secA | 1547726..1550089 (-) | 2364 | WP_004270228.1 | preprotein translocase subunit SecA | - |
| EQK21_RS07775 (EQK21_07775) | raiA | 1550318..1550863 (-) | 546 | WP_004270226.1 | ribosome-associated translation inhibitor RaiA | - |
| EQK21_RS07780 (EQK21_07780) | comFC | 1550989..1551519 (-) | 531 | WP_148484979.1 | ComF family protein | Machinery gene |
| EQK21_RS07785 (EQK21_07785) | comFA | 1551663..1552997 (-) | 1335 | WP_241653695.1 | DEAD/DEAH box helicase | Machinery gene |
| EQK21_RS07790 (EQK21_07790) | - | 1553054..1553716 (+) | 663 | WP_128530816.1 | YigZ family protein | - |
| EQK21_RS07795 (EQK21_07795) | - | 1553741..1554829 (-) | 1089 | WP_004270225.1 | MraY family glycosyltransferase | - |
| EQK21_RS07800 (EQK21_07800) | hemH | 1554939..1555880 (-) | 942 | WP_128530817.1 | ferrochelatase | - |
Sequence
Protein
Download Length: 176 a.a. Molecular weight: 20693.79 Da Isoelectric Point: 9.7337
>NTDB_id=334604 EQK21_RS07780 WP_148484979.1 1550989..1551519(-) (comFC) [Latilactobacillus curvatus strain SRCM103465]
MTTQGVCPDCQRWQQLYPGEQFTNRALLTYNEPMQQYFQRYKGQGDYRLRHVFQRLIRENFPVQRQTAYIPVPTDPTHLQ
SRGFNPVVGLYEDCFPLTPLLQKLPTEKGQAQKNRAERLATPQFFKCAQNVLLSSKVQQLILLDDIYTTGRTLWHAQQCL
RKRYQTLPIHAITLVH
MTTQGVCPDCQRWQQLYPGEQFTNRALLTYNEPMQQYFQRYKGQGDYRLRHVFQRLIRENFPVQRQTAYIPVPTDPTHLQ
SRGFNPVVGLYEDCFPLTPLLQKLPTEKGQAQKNRAERLATPQFFKCAQNVLLSSKVQQLILLDDIYTTGRTLWHAQQCL
RKRYQTLPIHAITLVH
Nucleotide
Download Length: 531 bp
>NTDB_id=334604 EQK21_RS07780 WP_148484979.1 1550989..1551519(-) (comFC) [Latilactobacillus curvatus strain SRCM103465]
ATGACAACCCAGGGGGTGTGTCCGGATTGCCAGAGATGGCAGCAACTGTATCCAGGCGAACAATTTACTAATCGAGCGTT
ATTAACATACAACGAACCAATGCAACAGTATTTTCAACGCTATAAGGGGCAGGGGGATTATCGATTACGTCACGTATTTC
AACGGCTGATTCGAGAAAATTTTCCTGTGCAACGGCAAACGGCGTATATCCCAGTCCCGACTGATCCAACACATTTGCAA
AGCCGCGGATTCAATCCGGTGGTTGGCTTATACGAGGACTGTTTTCCACTGACCCCATTGTTGCAGAAGCTACCAACTGA
AAAAGGACAAGCACAAAAAAATCGTGCAGAGCGCTTAGCAACGCCGCAATTTTTTAAATGCGCGCAGAACGTGCTGTTGA
GTTCCAAGGTGCAGCAGTTAATTTTGTTGGATGATATTTATACCACTGGGCGCACGTTATGGCATGCTCAGCAGTGTCTC
CGCAAGCGATACCAAACGCTGCCAATTCACGCAATTACTTTAGTCCACTAG
ATGACAACCCAGGGGGTGTGTCCGGATTGCCAGAGATGGCAGCAACTGTATCCAGGCGAACAATTTACTAATCGAGCGTT
ATTAACATACAACGAACCAATGCAACAGTATTTTCAACGCTATAAGGGGCAGGGGGATTATCGATTACGTCACGTATTTC
AACGGCTGATTCGAGAAAATTTTCCTGTGCAACGGCAAACGGCGTATATCCCAGTCCCGACTGATCCAACACATTTGCAA
AGCCGCGGATTCAATCCGGTGGTTGGCTTATACGAGGACTGTTTTCCACTGACCCCATTGTTGCAGAAGCTACCAACTGA
AAAAGGACAAGCACAAAAAAATCGTGCAGAGCGCTTAGCAACGCCGCAATTTTTTAAATGCGCGCAGAACGTGCTGTTGA
GTTCCAAGGTGCAGCAGTTAATTTTGTTGGATGATATTTATACCACTGGGCGCACGTTATGGCATGCTCAGCAGTGTCTC
CGCAAGCGATACCAAACGCTGCCAATTCACGCAATTACTTTAGTCCACTAG
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Latilactobacillus sakei subsp. sakei 23K |
65.493 |
80.682 |
0.528 |