Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   BSN5_RS11560 Genome accession   NC_014976
Coordinates   2201965..2202813 (-) Length   282 a.a.
NCBI ID   WP_015715080.1    Uniprot ID   -
Organism   Bacillus subtilis BSn5     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2196965..2207813
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSN5_RS11540 (BSn5_11485) yyaE 2197498..2199501 (-) 2004 WP_015715077.1 molybdopterin-dependent oxidoreductase -
  BSN5_RS11545 (BSn5_11490) yyzM 2199552..2199758 (-) 207 WP_003226838.1 DUF951 family protein -
  BSN5_RS11550 (BSn5_11495) - 2199852..2200868 (-) 1017 WP_077670815.1 hypothetical protein -
  BSN5_RS11555 (BSn5_11500) yyaC 2201309..2201926 (+) 618 WP_015715079.1 spore protease YyaC -
  BSN5_RS11560 (BSn5_11505) spo0J 2201965..2202813 (-) 849 WP_015715080.1 stage 0 sporulation protein Spo0J Regulator
  BSN5_RS11565 (BSn5_11510) soj 2202806..2203567 (-) 762 WP_003219244.1 sporulation initiation inhibitor protein Soj -
  BSN5_RS11570 (BSn5_11515) yyaB 2203815..2204255 (+) 441 WP_015715081.1 PH domain-containing protein -
  BSN5_RS11575 (BSn5_11520) noc 2204306..2205157 (-) 852 WP_015250778.1 nucleoid occlusion protein -
  BSN5_RS11580 (BSn5_11525) rsmG 2205279..2205998 (-) 720 WP_015250777.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -

Sequence

Protein


Download         Length: 282 a.a.        Molecular weight: 32226.21 Da        Isoelectric Point: 8.3881

>NTDB_id=33455 BSN5_RS11560 WP_015715080.1 2201965..2202813(-) (spo0J) [Bacillus subtilis BSn5]
MAKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELKESVLQHGILQPLIVRKSLKGYDIVAGERR
FRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLT
LPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKELVKDAVLKERESY
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES

Nucleotide


Download         Length: 849 bp        

>NTDB_id=33455 BSN5_RS11560 WP_015715080.1 2201965..2202813(-) (spo0J) [Bacillus subtilis BSn5]
ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTAGATTTGTCTGAAGAGACAGTTGAAGAAATTAA
AATTGCCGATTTACGCCCTAATCCTTATCAGCCAAGAAAACACTTTGATGACGAGGCATTAGCTGAACTAAAAGAATCTG
TGCTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAGAAAATCTTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGT
TTTCGAGCGGCAAAGCTGGCAGGTTTAGATACAGTTCCGGCTATTGTCCGTGAATTATCAGAGGCGTTAATGAGGGAAAT
TGCTCTATTAGAAAACCTTCAGCGTGAAGATTTATCTCCGCTTGAAGAGGCTCAGGCATATGACTCCTTGTTGAAACACT
TAGATCTCACACAAGAGCAGCTCGCCAAACGTCTTGGGAAAAGCAGACCGCATATTGCGAATCATTTAAGACTGCTGACA
CTGCCAGAAAATATTCAGCAGCTTATTGCCGAAGGTACGCTTTCTATGGGACATGGACGCACGCTCCTTGGCTTGAAAAA
CAAAAATAAGCTTGAACCGCTGGTACAAAAAGTGATTGCGGAGCAGCTTAATGTTCGCCAGCTTGAGCAGCTGATTCAGC
AATTGAATCAGAATGTTCCACGTGAAACAAAGAAAAAAGAACTTGTGAAAGATGCGGTTCTAAAAGAACGGGAATCCTAT
CTCCAAAATTATTTTGGAACAACAGTTAATATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCTCTAA
TGAAGACCTTGACCGGATTTTAGAGCTTTTGTCTGAACGAGAATCGTAA

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(163-214)

ParB/Sulfiredoxin domain (ParB_N)

(24-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.923

92.199

0.387

Multiple sequence alignment