Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | EPY81_RS02420 | Genome accession | NZ_CP035109 |
| Coordinates | 484969..485442 (-) | Length | 157 a.a. |
| NCBI ID | WP_016802756.1 | Uniprot ID | A0A1C2SAU9 |
| Organism | Acinetobacter pittii strain NQ-003 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 479969..490442
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EPY81_RS02405 (EPY81_02415) | pilX | 482608..483417 (-) | 810 | WP_002117088.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| EPY81_RS02410 (EPY81_02420) | pilW | 483414..484415 (-) | 1002 | WP_002116811.1 | PilW family protein | Machinery gene |
| EPY81_RS02415 (EPY81_02425) | pilV | 484415..484975 (-) | 561 | WP_080564113.1 | type IV pilus modification protein PilV | Machinery gene |
| EPY81_RS02420 (EPY81_02430) | fimU | 484969..485442 (-) | 474 | WP_016802756.1 | pilus assembly FimT family protein | Machinery gene |
| EPY81_RS02425 (EPY81_02435) | ispH | 485612..486562 (-) | 951 | WP_002116992.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| EPY81_RS02430 (EPY81_02440) | gmk | 486685..487314 (+) | 630 | WP_002116973.1 | guanylate kinase | - |
| EPY81_RS02435 (EPY81_02445) | rpoZ | 487387..487665 (+) | 279 | WP_002116990.1 | DNA-directed RNA polymerase subunit omega | - |
| EPY81_RS02440 (EPY81_02450) | - | 487704..487859 (+) | 156 | Protein_467 | hypothetical protein | - |
| EPY81_RS02445 (EPY81_02455) | spoT | 487875..489980 (+) | 2106 | WP_002116807.1 | RelA/SpoT family protein | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16939.62 Da Isoelectric Point: 7.7942
>NTDB_id=334541 EPY81_RS02420 WP_016802756.1 484969..485442(-) (fimU) [Acinetobacter pittii strain NQ-003]
MRGIIPQDGFTLVELMVTIAVMAIIAMMAAPSMSNLLESKRLDGNQRDLINTLSEAKNQAILGRQDVSINLNSTALNTPT
SLNWKADSNNSLELKNIAADGTQSSLTATTLTFNANGVITNITQDTLLSICNSKINKKKILILTKLGTLIFKAEETC
MRGIIPQDGFTLVELMVTIAVMAIIAMMAAPSMSNLLESKRLDGNQRDLINTLSEAKNQAILGRQDVSINLNSTALNTPT
SLNWKADSNNSLELKNIAADGTQSSLTATTLTFNANGVITNITQDTLLSICNSKINKKKILILTKLGTLIFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=334541 EPY81_RS02420 WP_016802756.1 484969..485442(-) (fimU) [Acinetobacter pittii strain NQ-003]
ATGAGGGGAATTATTCCGCAAGACGGGTTCACCTTGGTTGAGCTTATGGTGACGATTGCGGTCATGGCTATTATCGCGAT
GATGGCTGCACCATCTATGTCGAATTTATTAGAAAGCAAACGACTAGATGGAAACCAACGAGATCTAATCAATACTTTAT
CGGAAGCAAAGAACCAAGCCATACTTGGTCGACAAGATGTATCCATTAATCTGAATTCAACAGCTTTAAATACTCCCACT
TCCTTGAATTGGAAAGCTGATTCCAATAACAGTCTTGAGCTTAAAAATATCGCTGCTGATGGTACGCAGAGTTCATTAAC
AGCAACGACTCTAACTTTTAATGCGAATGGGGTGATAACCAATATTACCCAAGATACACTTTTATCTATTTGTAATTCAA
AAATAAATAAAAAGAAAATTCTTATTTTAACAAAGCTTGGCACATTAATTTTTAAAGCTGAGGAGACATGTTAA
ATGAGGGGAATTATTCCGCAAGACGGGTTCACCTTGGTTGAGCTTATGGTGACGATTGCGGTCATGGCTATTATCGCGAT
GATGGCTGCACCATCTATGTCGAATTTATTAGAAAGCAAACGACTAGATGGAAACCAACGAGATCTAATCAATACTTTAT
CGGAAGCAAAGAACCAAGCCATACTTGGTCGACAAGATGTATCCATTAATCTGAATTCAACAGCTTTAAATACTCCCACT
TCCTTGAATTGGAAAGCTGATTCCAATAACAGTCTTGAGCTTAAAAATATCGCTGCTGATGGTACGCAGAGTTCATTAAC
AGCAACGACTCTAACTTTTAATGCGAATGGGGTGATAACCAATATTACCCAAGATACACTTTTATCTATTTGTAATTCAA
AAATAAATAAAAAGAAAATTCTTATTTTAACAAAGCTTGGCACATTAATTTTTAAAGCTGAGGAGACATGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
87.898 |
100 |
0.879 |