Detailed information NTG0334506

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: EM806_RS06860
• Genome accession: NZ_CP035106
• Coordinates: 1384855..1386108 (-)
• Length: 417 a.a.
• NCBI ID: WP_128480274.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain Hpbs3
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1379855..1391108

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EM806_RS06830	nadC	1380318..1381139 (-)	822	WP_128480270.1	carboxylating nicotinate-nucleotide diphosphorylase	-
EM806_RS06835	nadA	1381139..1382149 (-)	1011	WP_001141788.1	quinolinate synthase NadA	-
EM806_RS06840	-	1382139..1382942 (-)	804	WP_128480271.1	phosphatidylserine decarboxylase	-
EM806_RS06845	-	1382939..1383442 (-)	504	WP_128480272.1	helix-turn-helix domain-containing protein	-
EM806_RS06850	-	1383455..1383949 (-)	495	WP_000544981.1	hypothetical protein	-
EM806_RS06855	mqnP	1383942..1384826 (-)	885	WP_128480273.1	menaquinone biosynthesis prenyltransferase MqnP	-
EM806_RS06860	comEC/comE3	1384855..1386108 (-)	1254	WP_128480274.1	ComEC/Rec2 family competence protein	Machinery gene
EM806_RS06865	-	1386164..1387630 (-)	1467	WP_128480275.1	replicative DNA helicase	-
EM806_RS06870	-	1387641..1389035 (-)	1395	WP_128480276.1	NAD(P)H-hydrate dehydratase	-
EM806_RS06875	crdS	1389038..1390240 (-)	1203	WP_075653460.1	copper-sensing histidine kinase CrdS	-
EM806_RS06880	crdR	1390206..1390847 (-)	642	WP_024774021.1	copper response regulator transcription factor CrdR	-

Sequence

Protein

• Length: 417 a.a.
• Molecular weight: 47588.13 Da
• Isoelectric Point: 9.8752

>NTDB_id=334506 EM806_RS06860 WP_128480274.1 1384855..1386108(-) (comEC/comE3) [Helicobacter pylori strain Hpbs3]
MCGVILSLLLALNLYLEYLNYQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMIFYATIKEPLKNLQYRYAQFF
GKIKPCSFLESLRSCFFQTYSFSLTRKQDFKSHVRHFIDSAHSSALVGNLYRALFIGDSLNKDLRDRANALGINHLLAIS
GFHLGILSASVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRAFLMGLLGFLACFFGVRLLSF
KLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQAFFKTSSFLARSFQVISLSALVFLNMLIIAHAFFPMFSP
YQLFSIPLGLIFVVFFPLSLILHAVGLGSLLDGILNMPLMIPTISIPSPLWLLGAHLFLTILSARFFKVYLSMNVLSAGF
FLYCCYQYIIMPSSIVG

Nucleotide

• Length: 1254 bp

>NTDB_id=334506 EM806_RS06860 WP_128480274.1 1384855..1386108(-) (comEC/comE3) [Helicobacter pylori strain Hpbs3]
TTGTGTGGGGTTATTTTAAGCCTTTTGTTAGCGCTCAATCTTTATTTAGAATACTTGAATTACCAAAAGCTTGATTTTTC
AAAACCTACAAGCCTGAACGCTCAAATCTTGTTGCAATACCCCAAAACTAAAGATCAAAAAACCTATTTTGTTTTAAAGC
TCCAATCAAAGGGCATGATCTTTTATGCCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCTACGCGCAATTTTTT
GGCAAAATCAAACCTTGCTCATTTTTGGAGTCTTTAAGATCATGCTTTTTTCAAACTTATTCTTTTTCTTTAACACGAAA
ACAAGATTTCAAATCGCATGTGCGCCATTTCATTGATAGCGCTCATTCAAGCGCTTTAGTGGGTAATTTGTATCGAGCGT
TGTTTATAGGGGATAGCTTGAATAAAGACTTAAGAGATAGGGCTAACGCGTTAGGGATCAACCACTTACTAGCTATTAGC
GGATTCCATTTAGGGATTTTGAGCGCGAGCGTGTATTTTCTTTTCTCTCTTTTTTATACCCCCTTACAAAAACGCTATTT
CCCTTATAGGAACGCTTTTTATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTAGGGTATTTATTGCTATTAGATTTTT
TACCCTCTTTTTTCAGGGCGTTTTTAATGGGCTTGTTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGCTTTTGAGTTTT
AAACTTTTGATTTTAGCGTGCTGTATCGCTATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGT
TTGTGGGGTGTGGTATATCTTTTTATTCTTAAAACACACTCAAGCCTTTTTTAAAACCTCTTCTTTTTTGGCGCGATCTT
TTCAGGTCATAAGCTTAAGCGCGCTAGTGTTTTTGAACATGCTCATCATTGCGCATGCCTTTTTCCCTATGTTTTCACCC
TACCAACTCTTTAGCATTCCTTTAGGCTTGATTTTTGTCGTGTTTTTCCCTTTGAGTTTAATCTTGCATGCTGTGGGTTT
GGGGTCTTTGCTGGATGGTATTTTAAACATGCCTTTAATGATCCCTACGATTTCAATCCCTTCGCCTTTATGGCTTTTGG
GGGCGCATTTATTTTTAACGATTCTAAGCGCGCGTTTTTTTAAAGTTTATTTAAGCATGAATGTTTTAAGCGCGGGCTTT
TTCTTGTATTGTTGCTATCAATATATTATAATGCCTAGTTCAATTGTAGGTTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (139-361)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	93.765	100	0.938