Detailed information NTG0334423

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: FYA20_RS11315
• Genome accession: NZ_CP043181
• Coordinates: 2337980..2338963 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli O2:H6 strain PG20180057
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2332980..2343963

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FYA20_RS11285 (FYA20_11285)	bcsF	2333142..2333333 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
FYA20_RS11290 (FYA20_11290)	bcsG	2333330..2335009 (+)	1680	WP_000191567.1	cellulose biosynthesis protein BcsG	-
FYA20_RS11295 (FYA20_11295)	ldrD	2335095..2335202 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
FYA20_RS11305 (FYA20_11305)	yhjV	2335678..2336949 (+)	1272	WP_001334058.1	aromatic amino acid transport family protein	-
FYA20_RS11310 (FYA20_11310)	dppF	2336979..2337983 (-)	1005	WP_000103579.1	dipeptide ABC transporter ATP-binding subunit DppF	-
FYA20_RS11315 (FYA20_11315)	amiE	2337980..2338963 (-)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
FYA20_RS11320 (FYA20_11320)	dppC	2338974..2339876 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
FYA20_RS11325 (FYA20_11325)	dppB	2339886..2340905 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
FYA20_RS25160	-	2340923..2341150 (+)	228	WP_000198576.1	hypothetical protein	-
FYA20_RS11335 (FYA20_11335)	dppA	2341212..2342819 (-)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=334423 FYA20_RS11315 WP_001196477.1 2337980..2338963(-) (amiE) [Escherichia coli O2:H6 strain PG20180057]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=334423 FYA20_RS11315 WP_001196477.1 2337980..2338963(-) (amiE) [Escherichia coli O2:H6 strain PG20180057]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTAAATCTGGTTGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404