Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   BSN5_RS08380 Genome accession   NC_014976
Coordinates   1580431..1581144 (-) Length   237 a.a.
NCBI ID   WP_003244535.1    Uniprot ID   O06978
Organism   Bacillus subtilis BSn5     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1575431..1586144
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSN5_RS08360 (BSn5_08270) ghrB 1575576..1576553 (+) 978 WP_074794322.1 D-glycerate dehydrogenase -
  BSN5_RS08365 (BSn5_08275) psdB 1576590..1578530 (-) 1941 WP_015714768.1 lantibiotic ABC transporter permease PsdB -
  BSN5_RS08370 (BSn5_08280) psdA 1578505..1579284 (-) 780 WP_015714769.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  BSN5_RS08375 (BSn5_08285) psdS 1579367..1580437 (-) 1071 WP_015714770.1 two-component sensor histidine kinase PsdS -
  BSN5_RS08380 (BSn5_08290) braR 1580431..1581144 (-) 714 WP_003244535.1 two-component system response regulator PsdR Regulator
  BSN5_RS08385 (BSn5_08295) - 1581291..1581500 (+) 210 WP_014665489.1 hypothetical protein -
  BSN5_RS08390 (BSn5_08300) yvcN 1581536..1582300 (-) 765 WP_015714771.1 arylamine N-acetyltransferase -
  BSN5_RS08395 (BSn5_08305) crh 1582301..1582558 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  BSN5_RS08400 (BSn5_08310) whiA 1582582..1583532 (-) 951 WP_003243775.1 DNA-binding protein WhiA -
  BSN5_RS08405 (BSn5_08315) mgfK 1583555..1584508 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  BSN5_RS08410 (BSn5_08320) rapZ 1584510..1585397 (-) 888 WP_003243903.1 RNase adapter RapZ -
  BSN5_RS08415 (BSn5_08325) rppI 1585422..1585898 (-) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27514.39 Da        Isoelectric Point: 4.6062

>NTDB_id=33435 BSN5_RS08380 WP_003244535.1 1580431..1581144(-) (braR) [Bacillus subtilis BSn5]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=33435 BSN5_RS08380 WP_003244535.1 1580431..1581144(-) (braR) [Bacillus subtilis BSn5]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGTAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCAAGAATAG
TGGAGCTTGGCGGGCTGACGATTTATCCTGATCAAAATGAAGCGGAGTGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O06978

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43

Multiple sequence alignment