Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   BSN5_RS05975 Genome accession   NC_014976
Coordinates   1121502..1122197 (-) Length   231 a.a.
NCBI ID   WP_015714560.1    Uniprot ID   -
Organism   Bacillus subtilis BSn5     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1116502..1127197
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSN5_RS05955 (BSn5_06020) yttA 1116929..1117675 (+) 747 WP_015714557.1 LMBR1 domain-containing protein -
  BSN5_RS05960 (BSn5_06025) bceB 1117712..1119652 (-) 1941 WP_015714558.1 bacitracin ABC transporter permease BceB -
  BSN5_RS05965 (BSn5_06030) bceA 1119642..1120403 (-) 762 WP_015714559.1 bacitracin ABC transporter ATP-binding protein BceA -
  BSN5_RS05970 (BSn5_06035) bceS 1120505..1121509 (-) 1005 WP_003229135.1 two-component sensor histidine kinase BceS -
  BSN5_RS05975 (BSn5_06040) braR 1121502..1122197 (-) 696 WP_015714560.1 two-component response regulator BceR Regulator
  BSN5_RS05980 (BSn5_06045) ytrF 1122294..1123604 (-) 1311 WP_015714561.1 ABC transporter permease YtrF -
  BSN5_RS05985 (BSn5_06050) ytrE 1123594..1124289 (-) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  BSN5_RS05990 (BSn5_06055) ytrD 1124304..1125281 (-) 978 WP_015714562.1 ABC transporter permease YtrD -
  BSN5_RS05995 (BSn5_06060) ytrC 1125311..1126297 (-) 987 WP_015714563.1 ABC transporter permease YtrC -
  BSN5_RS06000 (BSn5_06065) ytrB 1126291..1127169 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26937.82 Da        Isoelectric Point: 5.3819

>NTDB_id=33425 BSN5_RS05975 WP_015714560.1 1121502..1122197(-) (braR) [Bacillus subtilis BSn5]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRQIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNEKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLEVLQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=33425 BSN5_RS05975 WP_015714560.1 1121502..1122197(-) (braR) [Bacillus subtilis BSn5]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCAGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATCCAAAAGCCATTTCATTTTGATGT
GCTGATTGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGAAAAAGGATCTGTTGAACTGACCAAAAATGAGATGTTCATT
CTTAAACAACTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGAGGTCCTGCAGCTAGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377

Multiple sequence alignment