Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | EP552_RS01560 | Genome accession | NZ_CP035051 |
| Coordinates | 329572..330213 (+) | Length | 213 a.a. |
| NCBI ID | WP_000201227.1 | Uniprot ID | A0A009HSE6 |
| Organism | Acinetobacter baumannii strain ABUH763 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 324572..335213
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EP552_RS01540 (EP552_01540) | - | 324619..324951 (+) | 333 | WP_000169594.1 | hypothetical protein | - |
| EP552_RS01545 (EP552_01545) | - | 324954..325778 (+) | 825 | WP_002019666.1 | putative RNA methyltransferase | - |
| EP552_RS01550 (EP552_01550) | ponA | 325796..328351 (-) | 2556 | WP_000736677.1 | penicillin-binding protein PBP1a | - |
| EP552_RS01555 (EP552_01555) | pilM | 328514..329572 (+) | 1059 | WP_002014066.1 | pilus assembly protein PilM | Machinery gene |
| EP552_RS01560 (EP552_01560) | pilN | 329572..330213 (+) | 642 | WP_000201227.1 | PilN domain-containing protein | Machinery gene |
| EP552_RS01565 (EP552_01565) | pilO | 330210..330950 (+) | 741 | WP_000076101.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| EP552_RS01570 (EP552_01570) | pilP | 330961..331488 (+) | 528 | WP_000695065.1 | pilus assembly protein PilP | Machinery gene |
| EP552_RS01575 (EP552_01575) | pilQ | 331556..333721 (+) | 2166 | WP_001017033.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| EP552_RS01580 (EP552_01580) | aroK | 333733..334302 (+) | 570 | WP_000643712.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 213 a.a. Molecular weight: 24019.35 Da Isoelectric Point: 5.3968
>NTDB_id=334244 EP552_RS01560 WP_000201227.1 329572..330213(+) (pilN) [Acinetobacter baumannii strain ABUH763]
MATINLLPWREELREQRKKQFITLCFGVVVLGITTVFGGWFYFDHKLDDQEQANQLIMSTNQNLDQQLKTLNGLQEQRDA
IIERMKLIQGLQSQRPVVVRLVDELVRVTPSAMYLTKFSRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMNSFLA
NEEKKDKAASSLLPRVEDHYGSFVVTVDLGEMGVTTTDDSAKPSTGESVGAAK
MATINLLPWREELREQRKKQFITLCFGVVVLGITTVFGGWFYFDHKLDDQEQANQLIMSTNQNLDQQLKTLNGLQEQRDA
IIERMKLIQGLQSQRPVVVRLVDELVRVTPSAMYLTKFSRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMNSFLA
NEEKKDKAASSLLPRVEDHYGSFVVTVDLGEMGVTTTDDSAKPSTGESVGAAK
Nucleotide
Download Length: 642 bp
>NTDB_id=334244 EP552_RS01560 WP_000201227.1 329572..330213(+) (pilN) [Acinetobacter baumannii strain ABUH763]
ATGGCAACAATTAATTTACTGCCTTGGCGCGAAGAGCTGAGGGAGCAACGAAAAAAACAATTTATAACGTTATGTTTTGG
GGTGGTTGTTTTGGGGATTACAACCGTATTTGGGGGATGGTTTTATTTTGACCATAAATTAGATGATCAAGAGCAAGCGA
ATCAGCTCATTATGAGCACAAATCAGAACCTTGATCAGCAATTAAAAACATTAAACGGCTTACAGGAACAGCGTGATGCC
ATTATTGAACGCATGAAGTTGATTCAAGGTTTGCAGAGTCAACGTCCAGTAGTGGTAAGACTTGTTGATGAGTTAGTTCG
AGTCACACCATCAGCTATGTATTTAACGAAATTTAGCCGAACCGGAGATAAGTTTACGATTGAAGGTAAAGCTGAGAGTC
CAAATACAGTAGCCGAACTACTCCGTAATCTTGAAGCATCTCCTTGGTATCGTAATGCTTTTATGAACTCTTTCTTGGCT
AATGAAGAGAAAAAAGATAAGGCTGCAAGTTCTCTTCTTCCTAGGGTGGAAGACCACTATGGTAGTTTTGTTGTGACTGT
CGATTTGGGGGAAATGGGCGTGACCACAACGGATGATTCTGCTAAGCCATCTACAGGTGAAAGTGTGGGGGCCGCTAAAT
GA
ATGGCAACAATTAATTTACTGCCTTGGCGCGAAGAGCTGAGGGAGCAACGAAAAAAACAATTTATAACGTTATGTTTTGG
GGTGGTTGTTTTGGGGATTACAACCGTATTTGGGGGATGGTTTTATTTTGACCATAAATTAGATGATCAAGAGCAAGCGA
ATCAGCTCATTATGAGCACAAATCAGAACCTTGATCAGCAATTAAAAACATTAAACGGCTTACAGGAACAGCGTGATGCC
ATTATTGAACGCATGAAGTTGATTCAAGGTTTGCAGAGTCAACGTCCAGTAGTGGTAAGACTTGTTGATGAGTTAGTTCG
AGTCACACCATCAGCTATGTATTTAACGAAATTTAGCCGAACCGGAGATAAGTTTACGATTGAAGGTAAAGCTGAGAGTC
CAAATACAGTAGCCGAACTACTCCGTAATCTTGAAGCATCTCCTTGGTATCGTAATGCTTTTATGAACTCTTTCTTGGCT
AATGAAGAGAAAAAAGATAAGGCTGCAAGTTCTCTTCTTCCTAGGGTGGAAGACCACTATGGTAGTTTTGTTGTGACTGT
CGATTTGGGGGAAATGGGCGTGACCACAACGGATGATTCTGCTAAGCCATCTACAGGTGAAAGTGTGGGGGCCGCTAAAT
GA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |
| comN | Acinetobacter baylyi ADP1 |
71.905 |
98.592 |
0.709 |