Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | EP560_RS16440 | Genome accession | NZ_CP035045 |
| Coordinates | 3401497..3402024 (-) | Length | 175 a.a. |
| NCBI ID | WP_000695065.1 | Uniprot ID | N9K1N5 |
| Organism | Acinetobacter baumannii strain ABUH793 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3396497..3407024
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EP560_RS16420 (EP560_16420) | - | 3396681..3397556 (-) | 876 | WP_000218802.1 | hypothetical protein | - |
| EP560_RS16425 (EP560_16425) | aroB | 3397572..3398654 (-) | 1083 | WP_001193997.1 | 3-dehydroquinate synthase | - |
| EP560_RS16430 (EP560_16430) | aroK | 3398683..3399252 (-) | 570 | WP_000643712.1 | shikimate kinase AroK | - |
| EP560_RS16435 (EP560_16435) | pilQ | 3399264..3401429 (-) | 2166 | WP_001017033.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| EP560_RS16440 (EP560_16440) | pilP | 3401497..3402024 (-) | 528 | WP_000695065.1 | pilus assembly protein PilP | Machinery gene |
| EP560_RS16445 (EP560_16445) | pilO | 3402035..3402775 (-) | 741 | WP_000076101.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| EP560_RS16450 (EP560_16450) | pilN | 3402772..3403413 (-) | 642 | WP_000201227.1 | PilN domain-containing protein | Machinery gene |
| EP560_RS16455 (EP560_16455) | pilM | 3403413..3404471 (-) | 1059 | WP_002014066.1 | pilus assembly protein PilM | Machinery gene |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19419.64 Da Isoelectric Point: 8.9898
>NTDB_id=334186 EP560_RS16440 WP_000695065.1 3401497..3402024(-) (pilP) [Acinetobacter baumannii strain ABUH793]
MKIKQITLYVLACAVLVGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
MKIKQITLYVLACAVLVGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=334186 EP560_RS16440 WP_000695065.1 3401497..3402024(-) (pilP) [Acinetobacter baumannii strain ABUH793]
ATGAAAATTAAGCAAATTACTCTTTATGTTTTGGCGTGTGCTGTGCTTGTCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTAGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCCTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GCATGAATCAGGGCCGTATTACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCAGATGGTCGAGAAGGC
TATGTCGAAAGACCAAGAACATTGGTCTTGATTGGGCCTGCACCCTAA
ATGAAAATTAAGCAAATTACTCTTTATGTTTTGGCGTGTGCTGTGCTTGTCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTAGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCCTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GCATGAATCAGGGCCGTATTACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCAGATGGTCGAGAAGGC
TATGTCGAAAGACCAAGAACATTGGTCTTGATTGGGCCTGCACCCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |
| comL | Acinetobacter baylyi ADP1 |
71.839 |
99.429 |
0.714 |