Detailed information
Bioinformatically predicted
Overview
| Name | hns | Type | Regulator |
| Locus tag | EP560_RS00590 | Genome accession | NZ_CP035045 |
| Coordinates | 125608..125934 (+) | Length | 108 a.a. |
| NCBI ID | WP_000801427.1 | Uniprot ID | N9J3X5 |
| Organism | Acinetobacter baumannii strain ABUH793 | ||
| Function | repress the expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 120608..130934
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EP560_RS00565 (EP560_00565) | hemC | 121225..122142 (+) | 918 | WP_031944971.1 | hydroxymethylbilane synthase | - |
| EP560_RS00570 (EP560_00570) | - | 122147..122914 (+) | 768 | WP_000897421.1 | uroporphyrinogen-III synthase | - |
| EP560_RS00575 (EP560_00575) | - | 122923..123762 (+) | 840 | WP_001230204.1 | hypothetical protein | - |
| EP560_RS00580 (EP560_00580) | - | 123772..124965 (+) | 1194 | WP_000681783.1 | hypothetical protein | - |
| EP560_RS00585 (EP560_00585) | - | 124973..125413 (+) | 441 | WP_000661569.1 | acyl-CoA thioesterase | - |
| EP560_RS00590 (EP560_00590) | hns | 125608..125934 (+) | 327 | WP_000801427.1 | H-NS family nucleoid-associated regulatory protein | Regulator |
| EP560_RS00595 (EP560_00595) | gspN | 126267..127010 (+) | 744 | WP_000730343.1 | type II secretion system protein N | - |
| EP560_RS00600 (EP560_00600) | - | 127010..127846 (+) | 837 | WP_000870033.1 | type II secretion system protein N | - |
| EP560_RS00605 (EP560_00605) | gspD | 127888..130164 (+) | 2277 | WP_001196426.1 | type II secretion system secretin GspD | - |
| EP560_RS00610 (EP560_00610) | - | 130205..130834 (+) | 630 | WP_000219967.1 | FHA domain-containing protein | - |
Sequence
Protein
Download Length: 108 a.a. Molecular weight: 12462.12 Da Isoelectric Point: 5.0524
>NTDB_id=334153 EP560_RS00590 WP_000801427.1 125608..125934(+) (hns) [Acinetobacter baumannii strain ABUH793]
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
Nucleotide
Download Length: 327 bp
>NTDB_id=334153 EP560_RS00590 WP_000801427.1 125608..125934(+) (hns) [Acinetobacter baumannii strain ABUH793]
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTTAGTGTTGAACAACTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACGGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTTAGTGTTGAACAACTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACGGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| hns | Acinetobacter baumannii strain A118 |
100 |
100 |
1 |