Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | EP550_RS01565 | Genome accession | NZ_CP035043 |
| Coordinates | 330575..331216 (+) | Length | 213 a.a. |
| NCBI ID | WP_000201227.1 | Uniprot ID | A0A009HSE6 |
| Organism | Acinetobacter baumannii strain ABUH796 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 325575..336216
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EP550_RS01545 (EP550_01545) | - | 325622..325954 (+) | 333 | WP_000169594.1 | hypothetical protein | - |
| EP550_RS01550 (EP550_01550) | - | 325957..326781 (+) | 825 | WP_002019666.1 | putative RNA methyltransferase | - |
| EP550_RS01555 (EP550_01555) | ponA | 326799..329354 (-) | 2556 | WP_000736677.1 | penicillin-binding protein PBP1a | - |
| EP550_RS01560 (EP550_01560) | pilM | 329517..330575 (+) | 1059 | WP_002014066.1 | pilus assembly protein PilM | Machinery gene |
| EP550_RS01565 (EP550_01565) | pilN | 330575..331216 (+) | 642 | WP_000201227.1 | PilN domain-containing protein | Machinery gene |
| EP550_RS01570 (EP550_01570) | pilO | 331213..331953 (+) | 741 | WP_000076101.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| EP550_RS01575 (EP550_01575) | pilP | 331964..332491 (+) | 528 | WP_000695065.1 | pilus assembly protein PilP | Machinery gene |
| EP550_RS01580 (EP550_01580) | pilQ | 332559..334724 (+) | 2166 | WP_001017033.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| EP550_RS01585 (EP550_01585) | aroK | 334736..335305 (+) | 570 | WP_000643712.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 213 a.a. Molecular weight: 24019.35 Da Isoelectric Point: 5.3968
>NTDB_id=334106 EP550_RS01565 WP_000201227.1 330575..331216(+) (pilN) [Acinetobacter baumannii strain ABUH796]
MATINLLPWREELREQRKKQFITLCFGVVVLGITTVFGGWFYFDHKLDDQEQANQLIMSTNQNLDQQLKTLNGLQEQRDA
IIERMKLIQGLQSQRPVVVRLVDELVRVTPSAMYLTKFSRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMNSFLA
NEEKKDKAASSLLPRVEDHYGSFVVTVDLGEMGVTTTDDSAKPSTGESVGAAK
MATINLLPWREELREQRKKQFITLCFGVVVLGITTVFGGWFYFDHKLDDQEQANQLIMSTNQNLDQQLKTLNGLQEQRDA
IIERMKLIQGLQSQRPVVVRLVDELVRVTPSAMYLTKFSRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMNSFLA
NEEKKDKAASSLLPRVEDHYGSFVVTVDLGEMGVTTTDDSAKPSTGESVGAAK
Nucleotide
Download Length: 642 bp
>NTDB_id=334106 EP550_RS01565 WP_000201227.1 330575..331216(+) (pilN) [Acinetobacter baumannii strain ABUH796]
ATGGCAACAATTAATTTACTGCCTTGGCGCGAAGAGCTGAGGGAGCAACGAAAAAAACAATTTATAACGTTATGTTTTGG
GGTGGTTGTTTTGGGGATTACAACCGTATTTGGGGGATGGTTTTATTTTGACCATAAATTAGATGATCAAGAGCAAGCGA
ATCAGCTCATTATGAGCACAAATCAGAACCTTGATCAGCAATTAAAAACATTAAACGGCTTACAGGAACAGCGTGATGCC
ATTATTGAACGCATGAAGTTGATTCAAGGTTTGCAGAGTCAACGTCCAGTAGTGGTAAGACTTGTTGATGAGTTAGTTCG
AGTCACACCATCAGCTATGTATTTAACGAAATTTAGCCGAACCGGAGATAAGTTTACGATTGAAGGTAAAGCTGAGAGTC
CAAATACAGTAGCCGAACTACTCCGTAATCTTGAAGCATCTCCTTGGTATCGTAATGCTTTTATGAACTCTTTCTTGGCT
AATGAAGAGAAAAAAGATAAGGCTGCAAGTTCTCTTCTTCCTAGGGTGGAAGACCACTATGGTAGTTTTGTTGTGACTGT
CGATTTGGGGGAAATGGGCGTGACCACAACGGATGATTCTGCTAAGCCATCTACAGGTGAAAGTGTGGGGGCCGCTAAAT
GA
ATGGCAACAATTAATTTACTGCCTTGGCGCGAAGAGCTGAGGGAGCAACGAAAAAAACAATTTATAACGTTATGTTTTGG
GGTGGTTGTTTTGGGGATTACAACCGTATTTGGGGGATGGTTTTATTTTGACCATAAATTAGATGATCAAGAGCAAGCGA
ATCAGCTCATTATGAGCACAAATCAGAACCTTGATCAGCAATTAAAAACATTAAACGGCTTACAGGAACAGCGTGATGCC
ATTATTGAACGCATGAAGTTGATTCAAGGTTTGCAGAGTCAACGTCCAGTAGTGGTAAGACTTGTTGATGAGTTAGTTCG
AGTCACACCATCAGCTATGTATTTAACGAAATTTAGCCGAACCGGAGATAAGTTTACGATTGAAGGTAAAGCTGAGAGTC
CAAATACAGTAGCCGAACTACTCCGTAATCTTGAAGCATCTCCTTGGTATCGTAATGCTTTTATGAACTCTTTCTTGGCT
AATGAAGAGAAAAAAGATAAGGCTGCAAGTTCTCTTCTTCCTAGGGTGGAAGACCACTATGGTAGTTTTGTTGTGACTGT
CGATTTGGGGGAAATGGGCGTGACCACAACGGATGATTCTGCTAAGCCATCTACAGGTGAAAGTGTGGGGGCCGCTAAAT
GA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |
| comN | Acinetobacter baylyi ADP1 |
71.905 |
98.592 |
0.709 |