Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | FRD49_RS08140 | Genome accession | NZ_CP042994 |
| Coordinates | 1719072..1720178 (+) | Length | 368 a.a. |
| NCBI ID | WP_002050665.1 | Uniprot ID | A0AA36KAS4 |
| Organism | Acinetobacter nosocomialis strain J1A | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1714072..1725178
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FRD49_RS08095 (FRD49_08095) | - | 1714174..1714497 (+) | 324 | WP_032011547.1 | hypothetical protein | - |
| FRD49_RS08100 (FRD49_08100) | grxD | 1714544..1714885 (-) | 342 | WP_000138830.1 | Grx4 family monothiol glutaredoxin | - |
| FRD49_RS08105 (FRD49_08105) | - | 1715113..1716321 (+) | 1209 | WP_000129946.1 | aspartate aminotransferase family protein | - |
| FRD49_RS08110 (FRD49_08110) | - | 1716373..1716804 (-) | 432 | WP_002050640.1 | CBS domain-containing protein | - |
| FRD49_RS08115 (FRD49_08115) | - | 1716943..1717317 (-) | 375 | WP_001087274.1 | DUF2750 domain-containing protein | - |
| FRD49_RS08125 (FRD49_08125) | - | 1717729..1717962 (-) | 234 | WP_002050673.1 | hypothetical protein | - |
| FRD49_RS08130 (FRD49_08130) | - | 1718178..1718537 (+) | 360 | WP_002050680.1 | hypothetical protein | - |
| FRD49_RS08135 (FRD49_08135) | - | 1718638..1718964 (+) | 327 | WP_002050644.1 | hypothetical protein | - |
| FRD49_RS08140 (FRD49_08140) | pilA | 1719072..1720178 (+) | 1107 | WP_002050665.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| FRD49_RS08145 (FRD49_08145) | - | 1720366..1720962 (+) | 597 | WP_002050635.1 | nitroreductase family protein | - |
| FRD49_RS08150 (FRD49_08150) | - | 1721174..1721845 (+) | 672 | WP_017394078.1 | DUF2057 family protein | - |
| FRD49_RS08155 (FRD49_08155) | - | 1721922..1722446 (+) | 525 | WP_017394077.1 | GNAT family N-acetyltransferase | - |
| FRD49_RS08160 (FRD49_08160) | - | 1722457..1722756 (-) | 300 | WP_079377014.1 | cyd operon YbgE family protein | - |
| FRD49_RS08165 (FRD49_08165) | cydX | 1722757..1722858 (-) | 102 | WP_000270276.1 | cytochrome bd-I oxidase subunit CydX | - |
| FRD49_RS08170 (FRD49_08170) | cydB | 1722872..1724017 (-) | 1146 | WP_017394076.1 | cytochrome d ubiquinol oxidase subunit II | - |
Sequence
Protein
Download Length: 368 a.a. Molecular weight: 39917.75 Da Isoelectric Point: 5.0746
>NTDB_id=333977 FRD49_RS08140 WP_002050665.1 1719072..1720178(+) (pilA) [Acinetobacter nosocomialis strain J1A]
MQQQSNMQNKFLIDAEIGDDDVTLPNLPAIDVPIVESPVKQEVKAPEVVETAPSTEPEQPKSGFFGRMKEGLSKTRRNFT
DGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKPLHIDP
NKSPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNDIAVVAQGHGADSASVIFDAFE
SARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGITITKLD
GTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETEK
MQQQSNMQNKFLIDAEIGDDDVTLPNLPAIDVPIVESPVKQEVKAPEVVETAPSTEPEQPKSGFFGRMKEGLSKTRRNFT
DGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKPLHIDP
NKSPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNDIAVVAQGHGADSASVIFDAFE
SARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGITITKLD
GTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETEK
Nucleotide
Download Length: 1107 bp
>NTDB_id=333977 FRD49_RS08140 WP_002050665.1 1719072..1720178(+) (pilA) [Acinetobacter nosocomialis strain J1A]
ATGCAACAACAATCGAATATGCAAAATAAATTCTTGATAGATGCTGAGATCGGGGATGACGATGTCACATTGCCTAATTT
ACCTGCTATCGATGTTCCTATCGTTGAGTCACCTGTTAAGCAAGAAGTAAAAGCACCAGAAGTTGTCGAGACAGCACCTT
CAACTGAACCAGAGCAACCAAAATCAGGTTTCTTTGGGCGAATGAAAGAAGGTTTAAGCAAAACTCGCCGTAATTTCACC
GATGGTATGGTAAATATCTTAATTGGTGGTAAAGAAATTGATGATGAGCTGCTTGAAGAAGTTGAAGAGCAATTATTAGT
TGCAGATATTGGTGTAGATGCAACAAAAACGATTATTACCAACTTGACTGAACGTACTGCACGTGGCGATTTGATTTATT
CACATTCGCTTTATAAAGCCTTACAAGAAGAGTTGGTTGCTTTACTGGCTCCACGTGTGAAGCCTTTGCATATTGACCCT
AATAAATCACCTTATGTGATTTTAATGGTGGGCGTGAATGGTGTTGGAAAAACAACCACTATTGGTAAACTGGCTAAGCG
TTTACAAGGCGAAGGCAAGAAAGTCATGTTAGCAGCAGGTGACACATTCCGTGCAGCTGCTACTGAACAATTGCAAATTT
GGGGTGAGCGTAACGACATTGCTGTTGTCGCTCAAGGCCATGGTGCAGATAGTGCTTCGGTTATCTTCGATGCTTTTGAA
AGTGCGCGTGCTAAAGGTATTGATGTGTTAATTGCAGATACCGCAGGTCGTTTACATAACAAAAGCAACTTAATGGAAGA
GCTTAAAAAAGTTAAGCGTGTTATGCAAAAAATTGATGCTACGGCACCTCATGAAATTATGTTAGTAGTAGATGCAGGTA
CGGGGCAAAATGCAATTAACCAAGTACAAGAATTTGATCAAGCAGTAGGTTTAACTGGTATTACTATTACTAAGTTGGAC
GGTACTGCAAAAGGTGGTGTACTGTTTAATATTGCTAGTCGTACTCATGTACCAATTCGTTTTATTGGTGTGGGTGAAAA
AATTGATGATTTAAGACCGTTCTCGGCAAAATCATTTGTAGCGGCATTATTTGAAACAGAAAAGTAA
ATGCAACAACAATCGAATATGCAAAATAAATTCTTGATAGATGCTGAGATCGGGGATGACGATGTCACATTGCCTAATTT
ACCTGCTATCGATGTTCCTATCGTTGAGTCACCTGTTAAGCAAGAAGTAAAAGCACCAGAAGTTGTCGAGACAGCACCTT
CAACTGAACCAGAGCAACCAAAATCAGGTTTCTTTGGGCGAATGAAAGAAGGTTTAAGCAAAACTCGCCGTAATTTCACC
GATGGTATGGTAAATATCTTAATTGGTGGTAAAGAAATTGATGATGAGCTGCTTGAAGAAGTTGAAGAGCAATTATTAGT
TGCAGATATTGGTGTAGATGCAACAAAAACGATTATTACCAACTTGACTGAACGTACTGCACGTGGCGATTTGATTTATT
CACATTCGCTTTATAAAGCCTTACAAGAAGAGTTGGTTGCTTTACTGGCTCCACGTGTGAAGCCTTTGCATATTGACCCT
AATAAATCACCTTATGTGATTTTAATGGTGGGCGTGAATGGTGTTGGAAAAACAACCACTATTGGTAAACTGGCTAAGCG
TTTACAAGGCGAAGGCAAGAAAGTCATGTTAGCAGCAGGTGACACATTCCGTGCAGCTGCTACTGAACAATTGCAAATTT
GGGGTGAGCGTAACGACATTGCTGTTGTCGCTCAAGGCCATGGTGCAGATAGTGCTTCGGTTATCTTCGATGCTTTTGAA
AGTGCGCGTGCTAAAGGTATTGATGTGTTAATTGCAGATACCGCAGGTCGTTTACATAACAAAAGCAACTTAATGGAAGA
GCTTAAAAAAGTTAAGCGTGTTATGCAAAAAATTGATGCTACGGCACCTCATGAAATTATGTTAGTAGTAGATGCAGGTA
CGGGGCAAAATGCAATTAACCAAGTACAAGAATTTGATCAAGCAGTAGGTTTAACTGGTATTACTATTACTAAGTTGGAC
GGTACTGCAAAAGGTGGTGTACTGTTTAATATTGCTAGTCGTACTCATGTACCAATTCGTTTTATTGGTGTGGGTGAAAA
AATTGATGATTTAAGACCGTTCTCGGCAAAATCATTTGTAGCGGCATTATTTGAAACAGAAAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
52.597 |
83.696 |
0.44 |