Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   EO946_RS20940 Genome accession   NZ_CP034943
Coordinates   388537..388677 (+) Length   46 a.a.
NCBI ID   WP_013307914.1    Uniprot ID   -
Organism   Bacillus spizizenii ATCC 6633 = JCM 2499 strain ATCC 6633     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 383537..393677
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EO946_RS20935 srfAB 385401..388493 (+) 3093 Protein_354 surfactin non-ribosomal peptide synthetase SrfAB -
  EO946_RS20940 comS 388537..388677 (+) 141 WP_013307914.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5215.99 Da        Isoelectric Point: 8.5244

>NTDB_id=333622 EO946_RS20940 WP_013307914.1 388537..388677(+) (comS) [Bacillus spizizenii ATCC 6633 = JCM 2499 strain ATCC 6633]
MNRSGKHLISSIILYPQPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=333622 EO946_RS20940 WP_013307914.1 388537..388677(+) (comS) [Bacillus spizizenii ATCC 6633 = JCM 2499 strain ATCC 6633]
TTGAACCGATCAGGCAAGCACCTTATCAGCAGCATTATCCTGTATCCCCAGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTTTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978

Multiple sequence alignment