Detailed information
Bioinformatically predicted
Overview
| Name | med | Type | Regulator |
| Locus tag | EO946_RS06055 | Genome accession | NZ_CP034943 |
| Coordinates | 1175770..1176723 (+) | Length | 317 a.a. |
| NCBI ID | WP_003224557.1 | Uniprot ID | - |
| Organism | Bacillus spizizenii ATCC 6633 = JCM 2499 strain ATCC 6633 | ||
| Function | regulation of regulators (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1170770..1181723
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EO946_RS06030 (EO946_06030) | argF | 1172598..1173542 (+) | 945 | WP_003224547.1 | ornithine carbamoyltransferase | - |
| EO946_RS06035 (EO946_06035) | - | 1173643..1173822 (+) | 180 | WP_003224549.1 | YjzC family protein | - |
| EO946_RS06040 (EO946_06040) | - | 1173868..1174053 (-) | 186 | WP_003224551.1 | YjzD family protein | - |
| EO946_RS06045 (EO946_06045) | - | 1174304..1175038 (+) | 735 | WP_003224553.1 | hypothetical protein | - |
| EO946_RS06050 (EO946_06050) | - | 1175122..1175679 (+) | 558 | WP_003224555.1 | hypothetical protein | - |
| EO946_RS06055 (EO946_06055) | med | 1175770..1176723 (+) | 954 | WP_003224557.1 | transcriptional regulator Med | Regulator |
| EO946_RS06060 (EO946_06060) | comZ | 1176738..1176929 (+) | 192 | WP_003224559.1 | ComG operon transcriptional repressor ComZ | Regulator |
| EO946_RS06065 (EO946_06065) | - | 1176959..1177186 (-) | 228 | WP_072183380.1 | hypothetical protein | - |
| EO946_RS06070 (EO946_06070) | fabH | 1177352..1178290 (+) | 939 | WP_003224562.1 | beta-ketoacyl-ACP synthase III | - |
| EO946_RS06075 (EO946_06075) | fabF | 1178315..1179556 (+) | 1242 | WP_003224564.1 | beta-ketoacyl-ACP synthase II | - |
| EO946_RS06080 (EO946_06080) | - | 1179632..1180417 (+) | 786 | WP_003224566.1 | DUF2268 domain-containing protein | - |
| EO946_RS06085 (EO946_06085) | appD | 1180608..1181594 (+) | 987 | WP_003224568.1 | oligopeptide ABC transporter ATP-binding protein AppD | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35322.88 Da Isoelectric Point: 4.6608
>NTDB_id=333564 EO946_RS06055 WP_003224557.1 1175770..1176723(+) (med) [Bacillus spizizenii ATCC 6633 = JCM 2499 strain ATCC 6633]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTDEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVSEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHLSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLKTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTDEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVSEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHLSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLKTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE
Nucleotide
Download Length: 954 bp
>NTDB_id=333564 EO946_RS06055 WP_003224557.1 1175770..1176723(+) (med) [Bacillus spizizenii ATCC 6633 = JCM 2499 strain ATCC 6633]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTAAGCGGTTGTGGACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCAAAATACAATGTGGATGTCTACTATAAAGAAGGCGTTAAAACAGATGAAGATATTATAAATGCAATTGAGGAT
TTTCATAAGCGGGGTGTTAATCTTCTCTATGGCCATGGGAGTGAATATGCAGAGGTGTTTAACTTGGTCAGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCTAATGCTAAAGCAAAAGCTGATAATGTGACGAGTGTCCATTTCAGCGGCGAAGCAA
TGGGTTTTTTTGGAGGAATGACAGCTGCCCATCTGTCGAAAACGAATCAGGTCGGCGTGATTGCTTCCTTTACGTGGCAG
CCGGAGGTAGACGGTTTTATCAAAGGGGCCAAATATGAAAATCCGGATATAGAAGTCAACACAAAATATACGGATCATTG
GGATGATGATACGACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCTGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGCCTTTATGCCATCGGTTACGTCACAGATCAATCGGACCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCTTATGAAATCATCGCTGAGCAATTCAACAAAGG
CACCCTTGAAGGCGGCGATCATTACTACGACCTGAAAACGGGGGTTGTTGAAATGGGAACATTCAGCCCGCTTGTCGATA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACGTACAACAAAACAGGCGAACTGCCAAAAAACGAGTAA
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTAAGCGGTTGTGGACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCAAAATACAATGTGGATGTCTACTATAAAGAAGGCGTTAAAACAGATGAAGATATTATAAATGCAATTGAGGAT
TTTCATAAGCGGGGTGTTAATCTTCTCTATGGCCATGGGAGTGAATATGCAGAGGTGTTTAACTTGGTCAGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCTAATGCTAAAGCAAAAGCTGATAATGTGACGAGTGTCCATTTCAGCGGCGAAGCAA
TGGGTTTTTTTGGAGGAATGACAGCTGCCCATCTGTCGAAAACGAATCAGGTCGGCGTGATTGCTTCCTTTACGTGGCAG
CCGGAGGTAGACGGTTTTATCAAAGGGGCCAAATATGAAAATCCGGATATAGAAGTCAACACAAAATATACGGATCATTG
GGATGATGATACGACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCTGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGCCTTTATGCCATCGGTTACGTCACAGATCAATCGGACCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCTTATGAAATCATCGCTGAGCAATTCAACAAAGG
CACCCTTGAAGGCGGCGATCATTACTACGACCTGAAAACGGGGGTTGTTGAAATGGGAACATTCAGCCCGCTTGTCGATA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACGTACAACAAAACAGGCGAACTGCCAAAAAACGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| med | Bacillus subtilis subsp. subtilis str. 168 |
98.423 |
100 |
0.984 |