Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | EO946_RS00245 | Genome accession | NZ_CP034943 |
| Coordinates | 44535..44819 (-) | Length | 94 a.a. |
| NCBI ID | WP_003218316.1 | Uniprot ID | G4NTA5 |
| Organism | Bacillus spizizenii ATCC 6633 = JCM 2499 strain ATCC 6633 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 39535..49819
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EO946_RS00205 (EO946_00205) | darA | 39558..39887 (+) | 330 | WP_003218295.1 | cyclic di-AMP receptor DarA | - |
| EO946_RS00210 (EO946_00210) | - | 39900..40340 (+) | 441 | WP_003218297.1 | YaaR family protein | - |
| EO946_RS00215 (EO946_00215) | holB | 40352..41341 (+) | 990 | WP_003218299.1 | DNA polymerase III subunit delta' | - |
| EO946_RS00220 (EO946_00220) | ricT | 41344..42171 (+) | 828 | WP_003218300.1 | competence/sporulation regulator complex protein RicT | - |
| EO946_RS00225 (EO946_00225) | yabA | 42186..42545 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| EO946_RS00230 (EO946_00230) | - | 42604..43347 (+) | 744 | WP_003218310.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| EO946_RS00235 (EO946_00235) | - | 43334..43633 (+) | 300 | WP_003218311.1 | GIY-YIG nuclease family protein | - |
| EO946_RS00240 (EO946_00240) | rsmI | 43608..44486 (+) | 879 | WP_032727259.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| EO946_RS00245 (EO946_00245) | abrB | 44535..44819 (-) | 285 | WP_003218316.1 | transition state genes transcriptional regulator AbrB | Regulator |
| EO946_RS00250 (EO946_00250) | metG | 45320..47314 (+) | 1995 | WP_003218318.1 | methionine--tRNA ligase | - |
| EO946_RS00255 (EO946_00255) | - | 47393..48160 (+) | 768 | WP_003218320.1 | TatD family hydrolase | - |
| EO946_RS00260 (EO946_00260) | - | 48406..49629 (+) | 1224 | WP_003218322.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10494.25 Da Isoelectric Point: 6.3482
>NTDB_id=333546 EO946_RS00245 WP_003218316.1 44535..44819(-) (abrB) [Bacillus spizizenii ATCC 6633 = JCM 2499 strain ATCC 6633]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEGAE
QIISEIQNQLQNLK
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEGAE
QIISEIQNQLQNLK
Nucleotide
Download Length: 285 bp
>NTDB_id=333546 EO946_RS00245 WP_003218316.1 44535..44819(-) (abrB) [Bacillus spizizenii ATCC 6633 = JCM 2499 strain ATCC 6633]
ATGAAATCTACTGGTATTGTACGTAAAGTTGATGAGCTAGGACGTGTAGTTATTCCTATCGAATTGCGTCGTACTCTTGG
AATCGCAGAAAAAGATGCTCTTGAAATTTATGTTGATGACGAAAAAATCATCCTTAAAAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGCGCTGAG
CAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGAAATCTACTGGTATTGTACGTAAAGTTGATGAGCTAGGACGTGTAGTTATTCCTATCGAATTGCGTCGTACTCTTGG
AATCGCAGAAAAAGATGCTCTTGAAATTTATGTTGATGACGAAAAAATCATCCTTAAAAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGCGCTGAG
CAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |