Detailed information NTG0033314

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: VVMO6_RS01960
• Genome accession: NC_014965
• Coordinates: 400237..403059 (-)
• Length: 940 a.a.
• NCBI ID: WP_013571056.1
• Uniprot ID: -
• Organism: Vibrio vulnificus MO6-24/O
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 395237..408059

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VVMO6_RS01945 (VVM_00680)	lysC	395358..396707 (-)	1350	WP_013571054.1	lysine-sensitive aspartokinase 3	-
VVMO6_RS01950 (VVM_00681)	-	397221..398342 (+)	1122	WP_011151256.1	alanine--glyoxylate aminotransferase family protein	-
VVMO6_RS01955 (VVM_00684)	-	398407..400170 (-)	1764	WP_013571055.1	PglL family O-oligosaccharyltransferase	-
VVMO6_RS01960 (VVM_00688)	uvrA	400237..403059 (-)	2823	WP_013571056.1	excinuclease ABC subunit UvrA	Machinery gene
VVMO6_RS01965 (VVM_00690)	galU	403202..404074 (-)	873	WP_011079387.1	UTP--glucose-1-phosphate uridylyltransferase GalU	-
VVMO6_RS01970 (VVM_00692)	qstR	404260..404907 (-)	648	WP_011079388.1	response regulator transcription factor	Regulator
VVMO6_RS01975 (VVM_00693)	ssb	405207..405746 (+)	540	WP_011079389.1	single-stranded DNA-binding protein	Machinery gene
VVMO6_RS01980 (VVM_00695)	csrD	405899..407896 (+)	1998	WP_044023800.1	RNase E specificity factor CsrD	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 104017.52 Da
• Isoelectric Point: 6.5665

>NTDB_id=33314 VVMO6_RS01960 WP_013571056.1 400237..403059(-) (uvrA) [Vibrio vulnificus MO6-24/O]
MDKIEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPDHKVPLAAQTISQMVDKVLELPEGAKMMLLAPIVKERKG
EHVKTLENLAAQGFIRARIDGETCDLTDPPTLELHKKHTIEVVVDRFKVRGDLQQRLAESFETALELSGGIAVIAPMEGD
GEEIVFSANFACPHCGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPERVIQDANLSLAQGAIRGWDQKNYYYFQML
TSLAEHYDFDLHAPFNSLSKRIQEVILKGSGRTEIEFKYINDRGDIRLKRHPFEGILNTLERRYRDTESNSVREELVKYI
STKPCTSCGGTRLRLEARNVFINDTTLPQIVELSIADALTFFATLKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNTVLVVEHDEDAIRCADHVIDIG
PGAGVHGGQVVAEGTMAEILANPDSLTGQYLSGAKQIIVPTQRTPRDKNKTVELIGASGNNLKEVHLSVPVGLFSCITGV
SGSGKSTLINDTFFKIAHTQLNGATTAQPAPYKSIKGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFSGTQES
RSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVHYKGKSIDEVLEMTVEDAHEFFA
PVPVIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDH
GNTVVVIEHNLDVIKTADWIIDLGPEGGQGGGEIIAQGTPEDVAQIEGSHTARFLKPMLK

Nucleotide

• Length: 2823 bp

>NTDB_id=33314 VVMO6_RS01960 WP_013571056.1 400237..403059(-) (uvrA) [Vibrio vulnificus MO6-24/O]
ATGGACAAGATAGAAGTTCGCGGAGCACGTACCCATAATCTCAAAAACATAAATCTCACCATTCCCCGAGATAAACTGAT
CGTTATTACGGGCTTATCCGGCTCAGGTAAGTCTTCTTTGGCATTTGACACTTTGTACGCAGAGGGTCAGCGACGTTATG
TTGAATCCCTCTCTGCTTATGCTCGTCAATTTCTTTCATTGATGGAAAAGCCCGATGTTGACCACATTGAAGGCCTCTCG
CCAGCCATTTCTATCGAGCAAAAATCCACCTCACACAACCCGCGTTCAACCGTAGGGACCATCACCGAAGTGTATGACTA
CCTTCGCCTACTGTATGCCCGCGTTGGTGAGCCTCGCTGTCCTGACCACAAAGTCCCTTTAGCGGCTCAAACCATTAGCC
AAATGGTCGACAAAGTGCTGGAGCTGCCTGAAGGTGCCAAAATGATGTTGCTCGCCCCCATCGTGAAAGAGCGCAAAGGC
GAGCACGTTAAAACATTAGAGAATCTTGCTGCTCAAGGTTTTATCCGTGCGCGTATTGATGGAGAGACCTGTGACCTCAC
CGATCCACCAACGCTAGAGTTACACAAAAAGCACACCATTGAAGTGGTGGTTGACCGCTTTAAAGTGCGTGGCGATTTAC
AACAAAGGCTCGCAGAATCCTTTGAAACGGCACTGGAACTCTCAGGTGGCATCGCTGTGATTGCCCCTATGGAGGGTGAC
GGTGAAGAGATCGTTTTTTCCGCCAATTTTGCGTGTCCCCACTGTGGTTATAGTATGCAAGAGCTTGAGCCACGTTTGTT
CTCGTTCAATAACCCAGCAGGGGCTTGTGGCACCTGTGATGGCCTCGGGGTACAGCAATATTTTGACCCAGAACGTGTGA
TTCAAGATGCCAATTTAAGTCTTGCACAAGGGGCGATTCGTGGTTGGGATCAGAAGAACTATTACTATTTCCAAATGCTC
ACCTCGCTGGCTGAGCATTACGATTTCGATTTACATGCCCCTTTTAATTCGCTTTCAAAACGCATCCAAGAGGTCATCTT
AAAAGGCTCAGGGCGCACTGAAATCGAATTTAAGTACATCAACGATCGAGGCGACATTCGTCTTAAACGCCATCCATTTG
AAGGTATTCTCAATACACTCGAGCGCCGTTATCGCGACACCGAATCTAACTCGGTACGAGAAGAGTTGGTGAAATATATC
TCCACCAAACCTTGCACCAGTTGTGGCGGAACGCGTCTGCGCCTAGAAGCACGCAACGTGTTTATTAATGACACGACATT
GCCACAAATCGTCGAGTTGAGTATCGCGGATGCATTGACCTTTTTCGCCACCTTAAAACTCGAAGGGCAGCGAGCTCAAA
TTGCGGAGAAGGTCATGAAAGAGATCAACGATCGACTGCAGTTTTTAGTCAACGTTGGCCTCAATTATTTGAACCTGTCT
CGCAGCGCTGAAACCTTGTCTGGTGGCGAAGCACAGCGTATTCGTCTAGCTAGCCAGATCGGTGCCGGTTTGGTTGGCGT
GATGTACGTGCTCGATGAACCGTCAATCGGCCTTCACCAGCGTGACAACGAGCGCTTACTCAAAACACTCACGCACTTAC
GCGATCTCGGCAATACCGTATTAGTCGTAGAGCATGATGAAGATGCGATTCGTTGTGCCGACCATGTGATTGACATTGGC
CCTGGTGCAGGCGTACATGGTGGCCAAGTGGTTGCCGAAGGAACAATGGCCGAGATTCTCGCCAATCCAGATTCCTTGAC
CGGACAATACTTGAGCGGTGCCAAGCAGATTATTGTGCCGACTCAACGCACACCAAGAGATAAGAACAAAACCGTTGAGC
TCATTGGAGCCAGTGGCAACAACCTTAAAGAGGTCCATCTTTCGGTGCCTGTCGGGCTATTCAGTTGTATCACTGGGGTT
TCTGGTTCAGGTAAATCAACACTGATTAACGACACCTTCTTCAAAATTGCGCATACCCAACTCAATGGAGCGACCACAGC
TCAACCAGCGCCTTATAAGTCTATTAAAGGCTTAGAGCATTTTGATAAGGTCATCGATATCGACCAGAGCCCCATCGGTC
GCACACCGCGTTCGAATCCAGCAACCTATACGGGGATTTTCACTCCGATTCGAGAGCTGTTCTCCGGCACCCAAGAGTCT
CGTTCACGTGGCTATAAGCCAGGGCGTTTCAGCTTTAACGTTCGTGGTGGCCGCTGTGAAGCTTGCCAAGGTGATGGTGT
TATCAAGGTTGAAATGCACTTTTTACCTGATGTTTACGTCCCTTGTGATGTGTGTAAAGGCAAGCGCTACAACCGTGAAA
CGTTAGAAGTACACTACAAAGGGAAGAGCATCGATGAAGTGCTAGAGATGACCGTTGAAGACGCTCATGAGTTTTTCGCT
CCTGTCCCTGTCATCGCGCGTAAACTGCAAACCTTAATGGATGTTGGTCTTTCTTATATCCGTTTAGGTCAAGCGGCCAC
CACCCTCTCTGGCGGTGAAGCACAACGGGTGAAACTGGCCCGTGAGTTGTCCAAACGCGATACGGGCAAAACCCTTTATA
TTTTGGATGAACCAACAACGGGCCTACACTTCCACGATATCCAGCAACTTTTGACCGTATTGCATCGCTTACGTGATCAT
GGCAACACCGTTGTCGTGATTGAGCATAATTTAGATGTGATCAAAACGGCCGATTGGATCATCGACTTAGGTCCAGAAGG
CGGCCAAGGTGGAGGGGAAATCATTGCCCAAGGAACACCTGAAGATGTGGCGCAGATCGAAGGTTCGCATACCGCACGCT
TCCTTAAGCCTATGTTGAAATAG

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (130-236)

• ABC transporter (ABC_tran) (622-859)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-396)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	58.068	100	0.582
uvrA	Streptococcus pneumoniae TIGR4	58.068	100	0.582
uvrA	Streptococcus pneumoniae D39	58.068	100	0.582