Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ELQ88_RS33010 Genome accession   NZ_CP034783
Coordinates   6639917..6640321 (-) Length   134 a.a.
NCBI ID   WP_128870706.1    Uniprot ID   -
Organism   Pseudomonas sp. MPC6     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6634917..6645321
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELQ88_RS32990 (ELQ88_32995) - 6636725..6638782 (-) 2058 WP_128870696.1 methyl-accepting chemotaxis protein -
  ELQ88_RS33000 (ELQ88_33005) - 6638903..6639484 (-) 582 WP_128870697.1 chemotaxis protein CheW -
  ELQ88_RS33005 (ELQ88_33010) pilH 6639495..6639860 (-) 366 WP_007897961.1 twitching motility response regulator PilH -
  ELQ88_RS33010 (ELQ88_33015) pilG 6639917..6640321 (-) 405 WP_128870706.1 twitching motility response regulator PilG Regulator
  ELQ88_RS33015 (ELQ88_33020) gshB 6640683..6641654 (+) 972 WP_128870699.1 glutathione synthase -
  ELQ88_RS33020 (ELQ88_33025) - 6641761..6642660 (+) 900 WP_128870700.1 energy transducer TonB -
  ELQ88_RS33025 (ELQ88_33030) - 6642823..6643395 (+) 573 WP_128870707.1 YqgE/AlgH family protein -
  ELQ88_RS33030 (ELQ88_33035) ruvX 6643395..6643832 (+) 438 WP_005792259.1 Holliday junction resolvase RuvX -
  ELQ88_RS33035 (ELQ88_33040) pyrR 6643941..6644444 (+) 504 WP_128870702.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14646.06 Da        Isoelectric Point: 7.2443

>NTDB_id=333008 ELQ88_RS33010 WP_128870706.1 6639917..6640321(-) (pilG) [Pseudomonas sp. MPC6]
MEQHSSALKVMVIDDSKTIRRTAETLLRNVGCEVITAIDGFDALAKIVDNHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=333008 ELQ88_RS33010 WP_128870706.1 6639917..6640321(-) (pilG) [Pseudomonas sp. MPC6]
ATGGAACAGCATTCCAGCGCCTTGAAGGTCATGGTGATCGACGATTCGAAGACGATTCGCCGCACCGCCGAAACGCTGTT
GAGGAACGTGGGTTGTGAGGTCATCACGGCCATCGATGGTTTCGATGCCCTGGCCAAGATTGTCGATAATCACCCCGGCA
TCATCTTTGTCGACATCATGATGCCGCGTCTGGACGGTTATCAGACCTGCGCCTTGATCAAGAACAACAGCGCGTTCAAA
TCCACACCGGTGATTATGCTGTCGTCCAAGGACGGGCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCGGACCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGAACGCGATCCAGGCCCATGTACCGGGCTTCGCCGCCGTTTTGCCGC
AGTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

93.284

0.701

Multiple sequence alignment