Detailed information NTG0033297

Bioinformatically predicted

Overview

• Name: HI0659
• Type: Machinery gene
• Locus tag: SP70585_RS03195
• Genome accession: NC_012468
• Coordinates: 579014..579280 (+)
• Length: 88 a.a.
• NCBI ID: WP_001844589.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae 70585
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	578443..578891	579014..579280	flank	123

Gene organization within MGE regions

Location: 578443..579280

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SP70585_RS03185 (SP70585_0647)	-	578443..578888 (+)	446	Protein_605	transposase	-
SP70585_RS03195 (SP70585_0649)	HI0659	579014..579280 (+)	267	WP_001844589.1	helix-turn-helix domain-containing protein	Machinery gene

Sequence

Protein

• Length: 88 a.a.
• Molecular weight: 9629.24 Da
• Isoelectric Point: 5.1633

>NTDB_id=33297 SP70585_RS03195 WP_001844589.1 579014..579280(+) (HI0659) [Streptococcus pneumoniae 70585]
MEGCPSELFSKEEILESDMRVAIMSELIEARNKQGISQKKLEELSGVSQPVIARMETGKTSPQLDTVLKVLASLGKILAV
VRLEQGKS

Nucleotide

• Length: 267 bp

>NTDB_id=33297 SP70585_RS03195 WP_001844589.1 579014..579280(+) (HI0659) [Streptococcus pneumoniae 70585]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTAGCTATCATGAGCGAGTT
GATTGAAGCCAGAAATAAGCAAGGAATCAGTCAGAAAAAGCTAGAGGAACTCAGTGGAGTGAGTCAGCCTGTTATAGCTA
GGATGGAGACAGGTAAGACTAGTCCACAGTTGGACACAGTCTTAAAAGTCCTAGCTAGTCTAGGAAAGATACTAGCAGTC
GTCCGACTTGAACAGGGGAAAAGTTGA

Domains

Predicted by InterproScan.

• Helix-turn-helix (HTH_3) (28-75)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
HI0659	Haemophilus influenzae Rd KW20	59.74	87.5	0.523