Detailed information NTG0332938

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: CA899_RS00890
• Genome accession: NZ_CP042903
• Coordinates: 197855..198838 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain CFSAN061761
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 192855..203838

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CA899_RS00875 (CA899_000890)	dppA	193998..195605 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
CA899_RS00880 (CA899_000900)	dppB	195913..196932 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
CA899_RS00885 (CA899_000905)	dppC	196942..197844 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
CA899_RS00890 (CA899_000910)	amiE	197855..198838 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
CA899_RS00895 (CA899_000915)	dppF	198835..199839 (+)	1005	WP_083582891.1	dipeptide ABC transporter ATP-binding subunit DppF	-
CA899_RS00900 (CA899_000920)	yhjV	199869..201140 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
CA899_RS00905 (CA899_000930)	ldrD	201616..201723 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
CA899_RS00910 (CA899_000935)	bcsG	201810..203489 (-)	1680	WP_000191622.1	cellulose biosynthesis protein BcsG	-
CA899_RS00915 (CA899_000940)	bcsF	203486..203677 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=332938 CA899_RS00890 WP_001196486.1 197855..198838(+) (amiE) [Escherichia coli strain CFSAN061761]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=332938 CA899_RS00890 WP_001196486.1 197855..198838(+) (amiE) [Escherichia coli strain CFSAN061761]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404