Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   EM861_RS07885 Genome accession   NZ_CP034754
Coordinates   1662781..1663407 (+) Length   208 a.a.
NCBI ID   WP_022647658.1    Uniprot ID   A0A431SK42
Organism   Enterobacter hormaechei subsp. hoffmannii strain Eh1     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1657781..1668407
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EM861_RS07865 (EM861_07960) - 1658180..1659940 (-) 1761 WP_022647656.1 Lon protease family protein -
  EM861_RS07870 (EM861_07965) matP 1660127..1660579 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  EM861_RS07875 (EM861_07970) ompA 1660645..1661697 (-) 1053 WP_017694761.1 porin OmpA -
  EM861_RS07880 (EM861_07975) sulA 1662054..1662563 (-) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  EM861_RS07885 (EM861_07980) sxy/tfoX 1662781..1663407 (+) 627 WP_022647658.1 TfoX/Sxy family DNA transformation protein Regulator
  EM861_RS07890 (EM861_07985) yccS 1663364..1665526 (-) 2163 WP_022647659.1 YccS family putative transporter -
  EM861_RS07895 (EM861_07990) - 1665545..1665991 (-) 447 WP_022647660.1 YccF domain-containing protein -
  EM861_RS07900 (EM861_07995) helD 1666114..1668168 (+) 2055 WP_022647661.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23940.50 Da        Isoelectric Point: 9.4592

>NTDB_id=332857 EM861_RS07885 WP_022647658.1 1662781..1663407(+) (sxy/tfoX) [Enterobacter hormaechei subsp. hoffmannii strain Eh1]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSVLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=332857 EM861_RS07885 WP_022647658.1 1662781..1663407(+) (sxy/tfoX) [Enterobacter hormaechei subsp. hoffmannii strain Eh1]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGTGAGCTTTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCGTCCTCTGTTCTGACCCTGATGAAACGAGGACGTCCTGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A431SK42

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572

Multiple sequence alignment