Detailed information NTG0332856

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: CA898_RS00890
• Genome accession: NZ_CP042901
• Coordinates: 191030..192013 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain CFSAN061762
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 186030..197013

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CA898_RS00870 (CA898_000880)	dppA	187173..188780 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
CA898_RS24245 (CA898_000885)	-	188843..189070 (-)	228	WP_001300936.1	hypothetical protein	-
CA898_RS00880 (CA898_000890)	dppB	189088..190107 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
CA898_RS00885 (CA898_000895)	dppC	190117..191019 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
CA898_RS00890 (CA898_000900)	amiE	191030..192013 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
CA898_RS00895 (CA898_000905)	dppF	192010..193014 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
CA898_RS00900 (CA898_000910)	yhjV	193044..194315 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
CA898_RS00905 (CA898_000920)	ldrD	194791..194898 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
CA898_RS00910 (CA898_000925)	bcsG	194985..196664 (-)	1680	WP_000191622.1	cellulose biosynthesis protein BcsG	-
CA898_RS00915 (CA898_000930)	bcsF	196661..196852 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=332856 CA898_RS00890 WP_001196486.1 191030..192013(+) (amiE) [Escherichia coli strain CFSAN061762]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=332856 CA898_RS00890 WP_001196486.1 191030..192013(+) (amiE) [Escherichia coli strain CFSAN061762]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404