Detailed information NTG0332693

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: CA902_RS01035
• Genome accession: NZ_CP042896
• Coordinates: 231703..232686 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196481.1
• Uniprot ID: -
• Organism: Escherichia coli strain CFSAN061771
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 226703..237686

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CA902_RS01020 (CA902_001020)	dppA	228003..229610 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
CA902_RS01025 (CA902_001030)	dppB	229761..230780 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
CA902_RS01030 (CA902_001035)	dppC	230790..231692 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
CA902_RS01035 (CA902_001040)	amiE	231703..232686 (+)	984	WP_001196481.1	dipeptide ABC transporter ATP-binding protein	Regulator
CA902_RS01040 (CA902_001045)	dppF	232683..233687 (+)	1005	WP_000107033.1	dipeptide ABC transporter ATP-binding subunit DppF	-
CA902_RS01045 (CA902_001050)	yhjV	233717..234988 (-)	1272	WP_022646242.1	aromatic amino acid transport family protein	-
CA902_RS01050 (CA902_001060)	-	235464..235571 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
CA902_RS01055 (CA902_001070)	-	235946..236053 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
CA902_RS01060 (CA902_001080)	-	236430..236537 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
CA902_RS01065 (CA902_001090)	-	236914..237021 (+)	108	WP_000170736.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35798.31 Da
• Isoelectric Point: 6.5813

>NTDB_id=332693 CA902_RS01035 WP_001196481.1 231703..232686(+) (amiE) [Escherichia coli strain CFSAN061771]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAIAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=332693 CA902_RS01035 WP_001196481.1 231703..232686(+) (amiE) [Escherichia coli strain CFSAN061771]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATAGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGATAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGTCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCACTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.614	98.165	0.428
amiE	Streptococcus thermophilus LMG 18311	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMD-9	43.302	98.165	0.425
oppD	Streptococcus mutans UA159	41.693	97.554	0.407