Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ELZ95_RS13570 Genome accession   NZ_CP034706
Coordinates   2775663..2776268 (-) Length   201 a.a.
NCBI ID   WP_001202375.1    Uniprot ID   A0A5I0N148
Organism   Salmonella enterica subsp. enterica serovar Moero strain RSE28     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2770663..2781268
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ95_RS13555 (ELZ95_14045) helD 2770880..2772934 (-) 2055 WP_000420500.1 DNA helicase IV -
  ELZ95_RS13560 (ELZ95_14050) - 2773058..2773504 (+) 447 WP_001261222.1 YccF domain-containing protein -
  ELZ95_RS13565 (ELZ95_14055) yccS 2773523..2775676 (+) 2154 WP_000950869.1 YccS family putative transporter -
  ELZ95_RS13570 (ELZ95_14060) sxy/tfoX 2775663..2776268 (-) 606 WP_001202375.1 TfoX/Sxy family DNA transformation protein Regulator
  ELZ95_RS13575 (ELZ95_14065) sulA 2776485..2776994 (+) 510 WP_001726974.1 SOS-induced cell division inhibitor SulA -
  ELZ95_RS13580 (ELZ95_14070) ompA 2777351..2778403 (+) 1053 WP_001674965.1 porin OmpA -
  ELZ95_RS13585 (ELZ95_14075) matP 2778475..2778927 (-) 453 WP_000877172.1 macrodomain Ter protein MatP -
  ELZ95_RS13590 (ELZ95_14080) - 2779113..2780873 (+) 1761 WP_397609646.1 AAA family ATPase -

Sequence

Protein


Download         Length: 201 a.a.        Molecular weight: 23174.94 Da        Isoelectric Point: 8.7403

>NTDB_id=332681 ELZ95_RS13570 WP_001202375.1 2775663..2776268(-) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Moero strain RSE28]
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG

Nucleotide


Download         Length: 606 bp        

>NTDB_id=332681 ELZ95_RS13570 WP_001202375.1 2775663..2776268(-) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Moero strain RSE28]
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTTATGAAGTGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTGCGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATATTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5I0N148

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

75.879

99.005

0.751

Multiple sequence alignment