Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | SPP_RS09550 | Genome accession | NC_012467 |
| Coordinates | 1785965..1786360 (-) | Length | 131 a.a. |
| NCBI ID | WP_000282467.1 | Uniprot ID | A0A098Z0L0 |
| Organism | Streptococcus pneumoniae P1031 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1780965..1791360
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPP_RS09525 (SPP_1931) | recX | 1781041..1781817 (+) | 777 | WP_000705069.1 | recombination regulator RecX | - |
| SPP_RS09530 (SPP_1932) | - | 1781906..1782439 (+) | 534 | WP_000775321.1 | DUF402 domain-containing protein | - |
| SPP_RS09535 (SPP_1933) | - | 1782880..1783635 (-) | 756 | Protein_1815 | epoxyqueuosine reductase QueH | - |
| SPP_RS09540 (SPP_1935) | groL | 1783773..1785395 (-) | 1623 | WP_000031577.1 | chaperonin GroEL | - |
| SPP_RS09545 (SPP_1936) | groES | 1785411..1785695 (-) | 285 | WP_000917330.1 | co-chaperone GroES | - |
| SPP_RS09550 (SPP_1937) | ssbB/cilA | 1785965..1786360 (-) | 396 | WP_000282467.1 | single-stranded DNA-binding protein | Machinery gene |
| SPP_RS09555 (SPP_1938) | - | 1786438..1787199 (-) | 762 | WP_000240515.1 | SDR family oxidoreductase | - |
| SPP_RS09560 (SPP_1939) | ytpR | 1787232..1787858 (-) | 627 | WP_000578316.1 | YtpR family tRNA-binding protein | - |
| SPP_RS09565 (SPP_1940) | - | 1787874..1788191 (-) | 318 | WP_000615767.1 | thioredoxin family protein | - |
| SPP_RS09570 (SPP_1941) | - | 1788188..1788487 (-) | 300 | WP_001013974.1 | DUF4651 domain-containing protein | - |
| SPP_RS13590 | - | 1788685..1788765 (-) | 81 | WP_223200442.1 | hypothetical protein | - |
| SPP_RS09575 (SPP_1942) | - | 1788772..1788963 (-) | 192 | WP_000291826.1 | cell wall-binding protein | - |
| SPP_RS09580 (SPP_1943) | - | 1789124..1789798 (-) | 675 | WP_000725719.1 | LiaF transmembrane domain-containing protein | - |
| SPP_RS09585 (SPP_1944) | - | 1789803..1790249 (-) | 447 | WP_000776596.1 | LytTR family DNA-binding domain-containing protein | - |
| SPP_RS09590 (SPP_1945) | - | 1790363..1790866 (-) | 504 | WP_000800925.1 | phosphatase PAP2 family protein | - |
| SPP_RS09595 (SPP_1946) | - | 1790863..1791225 (-) | 363 | WP_000078810.1 | DUF2200 domain-containing protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14925.89 Da Isoelectric Point: 5.9409
>NTDB_id=33250 SPP_RS09550 WP_000282467.1 1785965..1786360(-) (ssbB/cilA) [Streptococcus pneumoniae P1031]
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=33250 SPP_RS09550 WP_000282467.1 1785965..1786360(-) (ssbB/cilA) [Streptococcus pneumoniae P1031]
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTGAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGCCAAATGAACTACGTGACCGAAGTACTTGTAACAGGATTCCAACTCTTGGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTAGTCTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTGAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGCCAAATGAACTACGTGACCGAAGTACTTGTAACAGGATTCCAACTCTTGGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTAGTCTTGGAAGAGGAAGAATTGCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus mitis SK321 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
98.473 |
100 |
0.985 |
| ssbA | Streptococcus mutans UA159 |
74.809 |
100 |
0.748 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
70.229 |
100 |
0.702 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.821 |
85.496 |
0.511 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.903 |
86.26 |
0.405 |