Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   EKQ63_RS21240 Genome accession   NZ_CP034686
Coordinates   3703829..3704287 (+) Length   152 a.a.
NCBI ID   WP_000804871.1    Uniprot ID   A0A516QVQ1
Organism   Bacillus sp. BD59S     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3698829..3709287
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EKQ63_RS21225 (EKQ63_21205) - 3699501..3699737 (+) 237 WP_000283744.1 hypothetical protein -
  EKQ63_RS21230 (EKQ63_21210) - 3699897..3702005 (-) 2109 WP_087954439.1 polyphosphate kinase -
  EKQ63_RS21235 (EKQ63_21215) ppx 3702113..3703651 (-) 1539 WP_087954438.1 exopolyphosphatase -
  EKQ63_RS21240 (EKQ63_21220) kre 3703829..3704287 (+) 459 WP_000804871.1 YkyB family protein Regulator
  EKQ63_RS21245 (EKQ63_21225) - 3704319..3704981 (-) 663 WP_087954437.1 YkyA family protein -
  EKQ63_RS21250 (EKQ63_21230) - 3705605..3706246 (-) 642 WP_000680842.1 diguanylate cyclase domain-containing protein -
  EKQ63_RS21255 (EKQ63_21235) - 3706411..3706640 (+) 230 Protein_3781 hypothetical protein -
  EKQ63_RS21260 (EKQ63_21240) - 3706672..3707172 (-) 501 WP_087954435.1 hypothetical protein -
  EKQ63_RS21265 (EKQ63_21245) - 3707598..3709139 (+) 1542 WP_087954434.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17773.49 Da        Isoelectric Point: 10.6793

>NTDB_id=332495 EKQ63_RS21240 WP_000804871.1 3703829..3704287(+) (kre) [Bacillus sp. BD59S]
MKPSQPQSQLQNQHSINRLAQSVFVVNRHAKAATNPKYLYWLKKTALERLITEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=332495 EKQ63_RS21240 WP_000804871.1 3703829..3704287(+) (kre) [Bacillus sp. BD59S]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTGTTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAATCCGAAGTATTTATACTGGTTAAAAAAGACAGCTTTAGAACGCTTAATTACTGAAA
AAAAAGCTATTAAAGAAGGATTACATTTCTCTAGAAATCCACGTTTTAGCCAACAACAATCTGATGTTCTTATACGTTTA
GGTGATTACTTTTTCCATATTCCTCCTACAAAAGAAGATTTTCGAATCCTACCACATCTCGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCGCTAAAAC
AAGAAAAAAAATTAAGTGAACCTGTCCCATGGTATAGTCGTACCTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A516QVQ1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

65.517

76.316

0.5

Multiple sequence alignment