Detailed information NTG0332450

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: FVA71_RS01370
• Genome accession: NZ_CP042878
• Coordinates: 296679..297662 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196487.1
• Uniprot ID: -
• Organism: Escherichia coli strain NMBU_W05E18
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 291679..302662

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FVA71_RS01355 (FVA71_01430)	dppA	292979..294586 (+)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-
FVA71_RS01360 (FVA71_01440)	dppB	294737..295756 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
FVA71_RS01365 (FVA71_01445)	dppC	295766..296668 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
FVA71_RS01370 (FVA71_01450)	amiE	296679..297662 (+)	984	WP_001196487.1	dipeptide ABC transporter ATP-binding protein	Regulator
FVA71_RS01375 (FVA71_01455)	dppF	297659..298663 (+)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
FVA71_RS01380 (FVA71_01460)	yhjV	298693..299963 (-)	1271	Protein_277	transporter	-
FVA71_RS01385 (FVA71_01470)	-	300439..300546 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
FVA71_RS01390 (FVA71_01480)	-	300923..301030 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
FVA71_RS01395 (FVA71_01490)	-	301406..301513 (+)	108	WP_001521561.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35860.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=332450 FVA71_RS01370 WP_001196487.1 296679..297662(+) (amiE) [Escherichia coli strain NMBU_W05E18]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLSDGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=332450 FVA71_RS01370 WP_001196487.1 296679..297662(+) (amiE) [Escherichia coli strain NMBU_W05E18]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTGATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCTCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.614	98.165	0.428
amiE	Streptococcus thermophilus LMG 18311	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMD-9	43.302	98.165	0.425
oppD	Streptococcus mutans UA159	41.693	97.554	0.407