Detailed information NTG0332369

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: DYL72_RS06090
• Genome accession: NZ_CP034672
• Coordinates: 1295958..1296965 (-)
• Length: 335 a.a.
• NCBI ID: WP_017043195.1
• Uniprot ID: A0AAW8GSK0
• Organism: Vibrio anguillarum strain J360
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1290958..1301965

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DYL72_RS06065 (DYL72_06065)	rraA	1291621..1292142 (-)	522	WP_026027418.1	ribonuclease E activity regulator RraA	-
DYL72_RS06070 (DYL72_06070)	-	1292219..1293136 (-)	918	WP_019282911.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
DYL72_RS06075 (DYL72_06075)	hslU	1293259..1294590 (-)	1332	WP_013855851.1	HslU--HslV peptidase ATPase subunit	-
DYL72_RS06080 (DYL72_06080)	hslV	1294626..1295192 (-)	567	WP_017046778.1	ATP-dependent protease subunit HslV	-
DYL72_RS06085 (DYL72_06085)	-	1295313..1295855 (-)	543	WP_013855850.1	SPOR domain-containing protein	-
DYL72_RS06090 (DYL72_06090)	cytR	1295958..1296965 (-)	1008	WP_017043195.1	DNA-binding transcriptional regulator CytR	Regulator
DYL72_RS06095 (DYL72_06095)	priA	1297271..1299472 (-)	2202	WP_019282912.1	primosomal protein N'	-
DYL72_RS06100 (DYL72_06100)	rpmE	1299741..1299956 (+)	216	WP_010318344.1	50S ribosomal protein L31	-
DYL72_RS06105 (DYL72_06105)	-	1300162..1301439 (+)	1278	WP_026027888.1	malic enzyme-like NAD(P)-binding protein	-
DYL72_RS06110 (DYL72_06110)	metJ	1301588..1301914 (-)	327	WP_010318342.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36770.41 Da
• Isoelectric Point: 6.6397

>NTDB_id=332369 DYL72_RS06090 WP_017043195.1 1295958..1296965(-) (cytR) [Vibrio anguillarum strain J360]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYFTEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSLVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPAEATLCKFRHQGYQQALRRAGITMNPNYCTYGDFTFEAGAKALRQLLALSEPPTA
IFSHNDSMAIGVIKEAKKLGLRVPQDISVVGFDDIQFALYCDPPLTTISQPRYEIGRQAMLMMLDLLRGQEVGAGSRLLE
TKLVIRESAAPPRLS

Nucleotide

• Length: 1008 bp

>NTDB_id=332369 DYL72_RS06090 WP_017043195.1 1295958..1296965(-) (cytR) [Vibrio anguillarum strain J360]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGTGTATCAACCGCCACGGTATCTAGGGCGTTGATGAACCCTGAAAA
AGTATCATCTTCAACGCGAAAGCGTGTCGAAGATGCTGTTTTGGAAGCTGGTTACTCACCAAATTCTCTCGCTCGCAACT
TACGCCGTAATGAATCTAAAACCATTGTCGCTATCGTGCCTGATATTTGTGACCCTTACTTCACAGAGATCATTCGTGGT
ATCGAAGATGCGGCGATGGAACATGGTTATTTAGTACTGTTGGGTGATAGTGGTCAGCAGAAAAAGCGAGAAAGTTCGTT
AGTTAACCTCGTATTTACTAAGCAGGCCGATGGCATGTTGTTGCTGGGAACGGATTTGCCGTTTGATGTTAGTAAGCCGG
AGCAAAAAAACCTGCCACCTATGGTCATGGCATGTGAATTTGCGCCAGAACTTGAGTTGCCGACGGTACATATTGATAAC
CTTACTTCAGCGTTTGAAGCGGTGAACTATTTGACGCAGCTCGGGCACAAACGCATCGCGCAAATATCGGGGCCAGCAGA
GGCCACGCTGTGTAAGTTCCGCCATCAAGGTTATCAACAAGCTTTACGCCGCGCAGGAATTACCATGAACCCTAATTATT
GCACTTATGGTGATTTTACTTTTGAAGCTGGGGCTAAAGCACTGCGCCAATTATTGGCGTTATCTGAGCCACCCACAGCC
ATTTTTAGTCATAATGACAGTATGGCGATCGGTGTCATTAAGGAAGCCAAAAAATTGGGCTTGCGCGTTCCACAAGATAT
TTCAGTGGTGGGATTTGATGATATTCAATTTGCGCTCTACTGCGATCCACCGTTAACGACCATCTCACAGCCGCGCTATG
AGATAGGGCGTCAAGCGATGCTCATGATGCTCGATCTTCTTCGCGGTCAAGAGGTTGGCGCAGGTTCTCGACTATTAGAA
ACCAAGTTAGTGATTCGAGAAAGCGCAGCGCCTCCTCGCTTGAGCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	92.169	99.104	0.913
cytR	Vibrio parahaemolyticus RIMD 2210633	87.387	99.403	0.869