Detailed information NTG0033219

Bioinformatically predicted

Overview

• Name: HI0659
• Type: Machinery gene
• Locus tag: SPP_RS02970
• Genome accession: NC_012467
• Coordinates: 541978..542244 (+)
• Length: 88 a.a.
• NCBI ID: WP_001844589.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae P1031
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	541405..541707	541978..542244	flank	271

Gene organization within MGE regions

Location: 541405..542244

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPP_RS02960 (SPP_0599)	-	541405..541852 (+)	448	Protein_564	IS30 family transposase	-
SPP_RS02970 (SPP_0601)	HI0659	541978..542244 (+)	267	WP_001844589.1	helix-turn-helix domain-containing protein	Machinery gene

Sequence

Protein

• Length: 88 a.a.
• Molecular weight: 9629.24 Da
• Isoelectric Point: 5.1633

>NTDB_id=33219 SPP_RS02970 WP_001844589.1 541978..542244(+) (HI0659) [Streptococcus pneumoniae P1031]
MEGCPSELFSKEEILESDMRVAIMSELIEARNKQGISQKKLEELSGVSQPVIARMETGKTSPQLDTVLKVLASLGKILAV
VRLEQGKS

Nucleotide

• Length: 267 bp

>NTDB_id=33219 SPP_RS02970 WP_001844589.1 541978..542244(+) (HI0659) [Streptococcus pneumoniae P1031]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTAGCTATCATGAGCGAGTT
GATTGAAGCCAGAAATAAGCAAGGAATCAGTCAGAAAAAGCTAGAGGAACTCAGTGGAGTGAGTCAGCCTGTTATAGCTA
GGATGGAGACAGGTAAGACTAGTCCACAGTTGGACACAGTCTTAAAAGTCCTAGCTAGTCTAGGAAAGATACTAGCAGTC
GTCCGACTTGAACAGGGGAAAAGTTGA

Domains

Predicted by InterproScan.

• Helix-turn-helix (HTH_3) (28-75)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
HI0659	Haemophilus influenzae Rd KW20	59.74	87.5	0.523